| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
Click here to switch to the map view.
The map label for this gene is 123969318
Identifier: 123969318
GI number: 123969318
Start: 1519858
End: 1521222
Strand: Reverse
Name: 123969318
Synonym: A9601_17861
Alternate gene names: NA
Gene position: 1521222-1519858 (Counterclockwise)
Preceding gene: 123969319
Following gene: 123969317
Centisome position: 91.1
GC content: 29.23
Gene sequence:
>1365_bases ATGAAATCACAAATAACCATAAAAAAAATTCAAGAGCTTTTGATTAAAGGAGTTAAAAAAATATATGTGGATGATGATAC ATCCAGAAGAATGTGGTGGGCTTCTTTAGAAGTTATTCAAAAAGATTTCCTTTATCAGAATTATAAACAGGGGGGGATAT GGGTTGCCTCGCCTTTGCCAGCCTTTAATGATAAAAAATTTTTAAATCAACTTCATGGATGGCTTTGGTCTCCTGAGGGG TTTCCATACTTTCAAAATGAGAATGCAGGTTTTTTACCAGTCAATAATTCAGAAAAGATAAAAAACGATTTCGATTTAAT TAGTAATTATAAAGTTTTAAACCTTTGTCAAGAAGATGGCTATGAACCTTTTTTGATGATAATCACTCCAAATTTTCAAT GCGTATTATCAATTGTAGGAGAAAAAGATAAGAAAATTCTATTAATGAAGTGTGATGAAGAGAGCCTTAAACTTTCAATT GAATTAATGCATGCAAAATTAAATCAAGAAAATTATGAGGAAGGAGTAAAATTTCGTAATGCAATTAATAACTTAGGCAA TCTTAATGTTAATAATCAATTTGAAAAATTATTTTGGCCAATATTATCGGCAAAATTAGCAAATTTCACGCCAAATCACA ATATACAGAATTCTGTGAATAATGATGAAAAAAATGTGCAAATAACTGAAGCAAAATTATTACGTGCAATATCTCATGAA GTAAGAACTCCTTTGACAACAATAAGAACCTTAATAAGTTCTACTTTAAAAAAATATAAAATGGATGAATCAATGAGAAA TCGTTTAATTCAAATAGATAATGAATGTAATGAACAAATTGATAGGTTTGGTTTAATCTTTAATGCAGCAGAATTAGTTG GTAATGAATTGCCATCATTGAATAACTTGGCGAAAATTAATTTAGCCGAAATTTTCAAAAAGCTTTCTCCTTTATGGAAT AAACAATTAAACCGACGTGGTATTTCTTTGAAGATAGATATCCCTAAACAACTTCCACAAATTTTGAGTGATTCTGAAAA ATTAGAATTAATGTTAAGAGGATTAATTGATAAAAATACTAGAGGATTAAAAGAAGGTAGTACATTAATTTTAGAATTAA GACCAGCTGGTCAAAAACTCAAACTTCAACTCAAAGTACAAAAATTAGATAACAATCAAAATGAAAATCTAAAAAAAGAT AACGGTTCTGATATTGGCCCTGTTTTAAATTGGAACCCTCAAACTGGAAGTTTACAACTTAGTCAAAATGCCACTCAAAA GTTGTTAGCTAGTCTAGGAGGGCATGTTACACAAAGACGTGATACAGGTTTGACAGTATTTTTTCCGATTTCAGATTCAA AATAA
Upstream 100 bases:
>100_bases TTCCTTTTATGAGCTATGGTCGAACGTCATTGGTGACCAATTTTATATCCATTGGATTTGTTTTATCTATATTAAAACGT TCTAGATCACTAAGAATTTG
Downstream 100 bases:
>100_bases AATGAGAAACAAGTTTTCCATATATTAAATAATGTAGAAAATTTGCTATGAATTTTGAATTTTGCAAAATATGAATGCTA GTTTCTTATTAGAAATAACT
Product: Signal transduction histidine kinase
Products: NA
Alternate protein names: Two-Component Sensor Histidine Kinase; Sensor Histidine Kinase; Signal Transduction Histidine Kinase; Histidine Kinase A Domain Protein; Two Component System Sensor Histidine Kinase; Sensory Transduction Histidine Kinase
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MKSQITIKKIQELLIKGVKKIYVDDDTSRRMWWASLEVIQKDFLYQNYKQGGIWVASPLPAFNDKKFLNQLHGWLWSPEG FPYFQNENAGFLPVNNSEKIKNDFDLISNYKVLNLCQEDGYEPFLMIITPNFQCVLSIVGEKDKKILLMKCDEESLKLSI ELMHAKLNQENYEEGVKFRNAINNLGNLNVNNQFEKLFWPILSAKLANFTPNHNIQNSVNNDEKNVQITEAKLLRAISHE VRTPLTTIRTLISSTLKKYKMDESMRNRLIQIDNECNEQIDRFGLIFNAAELVGNELPSLNNLAKINLAEIFKKLSPLWN KQLNRRGISLKIDIPKQLPQILSDSEKLELMLRGLIDKNTRGLKEGSTLILELRPAGQKLKLQLKVQKLDNNQNENLKKD NGSDIGPVLNWNPQTGSLQLSQNATQKLLASLGGHVTQRRDTGLTVFFPISDSK
Sequences:
>Translated_454_residues MKSQITIKKIQELLIKGVKKIYVDDDTSRRMWWASLEVIQKDFLYQNYKQGGIWVASPLPAFNDKKFLNQLHGWLWSPEG FPYFQNENAGFLPVNNSEKIKNDFDLISNYKVLNLCQEDGYEPFLMIITPNFQCVLSIVGEKDKKILLMKCDEESLKLSI ELMHAKLNQENYEEGVKFRNAINNLGNLNVNNQFEKLFWPILSAKLANFTPNHNIQNSVNNDEKNVQITEAKLLRAISHE VRTPLTTIRTLISSTLKKYKMDESMRNRLIQIDNECNEQIDRFGLIFNAAELVGNELPSLNNLAKINLAEIFKKLSPLWN KQLNRRGISLKIDIPKQLPQILSDSEKLELMLRGLIDKNTRGLKEGSTLILELRPAGQKLKLQLKVQKLDNNQNENLKKD NGSDIGPVLNWNPQTGSLQLSQNATQKLLASLGGHVTQRRDTGLTVFFPISDSK >Mature_454_residues MKSQITIKKIQELLIKGVKKIYVDDDTSRRMWWASLEVIQKDFLYQNYKQGGIWVASPLPAFNDKKFLNQLHGWLWSPEG FPYFQNENAGFLPVNNSEKIKNDFDLISNYKVLNLCQEDGYEPFLMIITPNFQCVLSIVGEKDKKILLMKCDEESLKLSI ELMHAKLNQENYEEGVKFRNAINNLGNLNVNNQFEKLFWPILSAKLANFTPNHNIQNSVNNDEKNVQITEAKLLRAISHE VRTPLTTIRTLISSTLKKYKMDESMRNRLIQIDNECNEQIDRFGLIFNAAELVGNELPSLNNLAKINLAEIFKKLSPLWN KQLNRRGISLKIDIPKQLPQILSDSEKLELMLRGLIDKNTRGLKEGSTLILELRPAGQKLKLQLKVQKLDNNQNENLKKD NGSDIGPVLNWNPQTGSLQLSQNATQKLLASLGGHVTQRRDTGLTVFFPISDSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52034; Mature: 52034
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSQITIKKIQELLIKGVKKIYVDDDTSRRMWWASLEVIQKDFLYQNYKQGGIWVASPLP CCCCCHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCC AFNDKKFLNQLHGWLWSPEGFPYFQNENAGFLPVNNSEKIKNDFDLISNYKVLNLCQEDG CCCCHHHHHHHHCCEECCCCCCEEECCCCCEEECCCCHHHHHHHHHHHCCHHHHHHHHCC YEPFLMIITPNFQCVLSIVGEKDKKILLMKCDEESLKLSIELMHAKLNQENYEEGVKFRN CCCEEEEECCCHHHHHHHHCCCCCEEEEEECCCCHHEEEHHHHHHHHCHHHHHHHHHHHH AINNLGNLNVNNQFEKLFWPILSAKLANFTPNHNIQNSVNNDEKNVQITEAKLLRAISHE HHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHH VRTPLTTIRTLISSTLKKYKMDESMRNRLIQIDNECNEQIDRFGLIFNAAELVGNELPSL HHCHHHHHHHHHHHHHHHHHCCHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHCCCCCC NNLAKINLAEIFKKLSPLWNKQLNRRGISLKIDIPKQLPQILSDSEKLELMLRGLIDKNT CCHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHCCCHHHHHHHHHHHCCCC RGLKEGSTLILELRPAGQKLKLQLKVQKLDNNQNENLKKDNGSDIGPVLNWNPQTGSLQL CCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEECCCCCCCEEE SQNATQKLLASLGGHVTQRRDTGLTVFFPISDSK CHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCC >Mature Secondary Structure MKSQITIKKIQELLIKGVKKIYVDDDTSRRMWWASLEVIQKDFLYQNYKQGGIWVASPLP CCCCCHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCC AFNDKKFLNQLHGWLWSPEGFPYFQNENAGFLPVNNSEKIKNDFDLISNYKVLNLCQEDG CCCCHHHHHHHHCCEECCCCCCEEECCCCCEEECCCCHHHHHHHHHHHCCHHHHHHHHCC YEPFLMIITPNFQCVLSIVGEKDKKILLMKCDEESLKLSIELMHAKLNQENYEEGVKFRN CCCEEEEECCCHHHHHHHHCCCCCEEEEEECCCCHHEEEHHHHHHHHCHHHHHHHHHHHH AINNLGNLNVNNQFEKLFWPILSAKLANFTPNHNIQNSVNNDEKNVQITEAKLLRAISHE HHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHH VRTPLTTIRTLISSTLKKYKMDESMRNRLIQIDNECNEQIDRFGLIFNAAELVGNELPSL HHCHHHHHHHHHHHHHHHHHCCHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHCCCCCC NNLAKINLAEIFKKLSPLWNKQLNRRGISLKIDIPKQLPQILSDSEKLELMLRGLIDKNT CCHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHCCCHHHHHHHHHHHCCCC RGLKEGSTLILELRPAGQKLKLQLKVQKLDNNQNENLKKDNGSDIGPVLNWNPQTGSLQL CCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEECCCCCCCEEE SQNATQKLLASLGGHVTQRRDTGLTVFFPISDSK CHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA