| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123969313
Identifier: 123969313
GI number: 123969313
Start: 1513153
End: 1513599
Strand: Reverse
Name: 123969313
Synonym: A9601_17811
Alternate gene names: NA
Gene position: 1513599-1513153 (Counterclockwise)
Preceding gene: 123969314
Following gene: 123969312
Centisome position: 90.64
GC content: 30.2
Gene sequence:
>447_bases TTGCAATATTTTTCTAAAAAAAAACTTGTTCTTCCAGAAGGTTATTTTGTTAACTCTTCTCAAATACCATTAGCTAAAGA AGTTAATAAACTTTTAGCTAATTGTGGTTGTGATACATTTCCAATAAAACCTTTTTCCGAGGCTATTGAGAAAAGTAATT TCTTTTTTACCATACAGAATGAATTAAAAAATAAGTTATATGGCTTTGTAAGGGTTACGTCTGATAGGGGGTTAAATGCA AACTTGTGGAATTTAAGTGCATTGCCAGGTAATAATCAGCAACTTTATTATTCAATATTGATTCAAGTAACTCTTGAGAA AATAAATAGAGAAATGCCTGGATGCAGTATTTCTGTACAGGCACCAGTATCTTCGTTTTTAAGTTTAGAGGAGAATGGAT TCATACTAGATCCAAATGGAATAAGAGTAATGGGATATAAACTTTAA
Upstream 100 bases:
>100_bases AGATGAATCTACAAGAGCTTACAGCAGAAGTGAACTATTAAGGGGAGCACTTTTAACTATTAATGGGATAGCAGCTGGTA TGAGAAATACAGGATAATAA
Downstream 100 bases:
>100_bases AAATGATGTTACGAGCATGGAGGGATTCGAACCCCCGACTCTCAGAACCGGAATCTGATGCTCTATCCAACTGAGCTACA TGCCCTTTAATTTTTCAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MQYFSKKKLVLPEGYFVNSSQIPLAKEVNKLLANCGCDTFPIKPFSEAIEKSNFFFTIQNELKNKLYGFVRVTSDRGLNA NLWNLSALPGNNQQLYYSILIQVTLEKINREMPGCSISVQAPVSSFLSLEENGFILDPNGIRVMGYKL
Sequences:
>Translated_148_residues MQYFSKKKLVLPEGYFVNSSQIPLAKEVNKLLANCGCDTFPIKPFSEAIEKSNFFFTIQNELKNKLYGFVRVTSDRGLNA NLWNLSALPGNNQQLYYSILIQVTLEKINREMPGCSISVQAPVSSFLSLEENGFILDPNGIRVMGYKL >Mature_148_residues MQYFSKKKLVLPEGYFVNSSQIPLAKEVNKLLANCGCDTFPIKPFSEAIEKSNFFFTIQNELKNKLYGFVRVTSDRGLNA NLWNLSALPGNNQQLYYSILIQVTLEKINREMPGCSISVQAPVSSFLSLEENGFILDPNGIRVMGYKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16709; Mature: 16709
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQYFSKKKLVLPEGYFVNSSQIPLAKEVNKLLANCGCDTFPIKPFSEAIEKSNFFFTIQN CCCCCCCCEECCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCEEEEEHH ELKNKLYGFVRVTSDRGLNANLWNLSALPGNNQQLYYSILIQVTLEKINREMPGCSISVQ HHHHHHEEEEEEECCCCCCCCEEEEEECCCCCCEEEEHHHHHHHHHHHHCCCCCCEEEEE APVSSFLSLEENGFILDPNGIRVMGYKL CCHHHHHEECCCCEEECCCCEEEEEEEC >Mature Secondary Structure MQYFSKKKLVLPEGYFVNSSQIPLAKEVNKLLANCGCDTFPIKPFSEAIEKSNFFFTIQN CCCCCCCCEECCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCEEEEEHH ELKNKLYGFVRVTSDRGLNANLWNLSALPGNNQQLYYSILIQVTLEKINREMPGCSISVQ HHHHHHEEEEEEECCCCCCCCEEEEEECCCCCCEEEEHHHHHHHHHHHHCCCCCCEEEEE APVSSFLSLEENGFILDPNGIRVMGYKL CCHHHHHEECCCCEEECCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA