Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

Click here to switch to the map view.

The map label for this gene is 123969238

Identifier: 123969238

GI number: 123969238

Start: 1450469

End: 1450987

Strand: Reverse

Name: 123969238

Synonym: A9601_17061

Alternate gene names: NA

Gene position: 1450987-1450469 (Counterclockwise)

Preceding gene: 123969240

Following gene: 123969235

Centisome position: 86.89

GC content: 34.87

Gene sequence:

>519_bases
ATGCTATTGTCTTTTGATGCTAAACAGAAACTTAAGCTTTCTGTAACACGTAATAAAGAATATCTTTCTAAATATCTTTT
GGAAGAAGAAAGAGTTGTTGGAGCAATGCTTGACTCCAAAAAATTAGTACCAGAAGGAGTAGGTAGATATAAGTATACAG
TAACAAGTTTTAAGGTTTTTCAATTGGATATTAACCCTGTTGTCTCAATTGCGGTAGAAAATAAAGATGGAATTTTAAAA
ATGAGTGCTCTTGAAAGTACATTGGATGGTTTGGGTATGGTTGATGATTTTAATCTTATTTTGAAAGCAAATTTGGAAGC
AACTGATATTGGCTTAGAAGGGGAGGCGCTTCTTGGAGTATCTGTAAGCCAACCCCCTCTACTGAAGCTGGTACCAAGGA
AGATTTTGGAATCTACTGGTCATTCGGTGTTAAATGGGATTCTGTTGGGTATAAAGTCAAGGGTTCAACAGCAGCTCGTA
AAAGATTTTTTAGAATGGTGTGAATTAAATAAGTTTTGA

Upstream 100 bases:

>100_bases
TTCTGCGTATGTTCCTTGAGGACCTAAATATGCAACTTGTTTGGGCATGATTAATCGTAAAAAAAAAAGAGATCAAATAA
GCATTGGAGGAATATAGAAA

Downstream 100 bases:

>100_bases
TTTTTTTAAAAAACTTTTCCTATGAAGTTCAGTTATTCCATTTTTTTTGATTAATGAAAGATGCTCTCTGGTTCCATAAC
CTTTATTTTTAAATATCAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MLLSFDAKQKLKLSVTRNKEYLSKYLLEEERVVGAMLDSKKLVPEGVGRYKYTVTSFKVFQLDINPVVSIAVENKDGILK
MSALESTLDGLGMVDDFNLILKANLEATDIGLEGEALLGVSVSQPPLLKLVPRKILESTGHSVLNGILLGIKSRVQQQLV
KDFLEWCELNKF

Sequences:

>Translated_172_residues
MLLSFDAKQKLKLSVTRNKEYLSKYLLEEERVVGAMLDSKKLVPEGVGRYKYTVTSFKVFQLDINPVVSIAVENKDGILK
MSALESTLDGLGMVDDFNLILKANLEATDIGLEGEALLGVSVSQPPLLKLVPRKILESTGHSVLNGILLGIKSRVQQQLV
KDFLEWCELNKF
>Mature_172_residues
MLLSFDAKQKLKLSVTRNKEYLSKYLLEEERVVGAMLDSKKLVPEGVGRYKYTVTSFKVFQLDINPVVSIAVENKDGILK
MSALESTLDGLGMVDDFNLILKANLEATDIGLEGEALLGVSVSQPPLLKLVPRKILESTGHSVLNGILLGIKSRVQQQLV
KDFLEWCELNKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19139; Mature: 19139

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLSFDAKQKLKLSVTRNKEYLSKYLLEEERVVGAMLDSKKLVPEGVGRYKYTVTSFKVF
CCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEE
QLDINPVVSIAVENKDGILKMSALESTLDGLGMVDDFNLILKANLEATDIGLEGEALLGV
EEECCCEEEEEEECCCCEEEHHHHHHHHHCCCCCCCCEEEEEECCCEEECCCCCCEEEEE
SVSQPPLLKLVPRKILESTGHSVLNGILLGIKSRVQQQLVKDFLEWCELNKF
CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLLSFDAKQKLKLSVTRNKEYLSKYLLEEERVVGAMLDSKKLVPEGVGRYKYTVTSFKVF
CCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEE
QLDINPVVSIAVENKDGILKMSALESTLDGLGMVDDFNLILKANLEATDIGLEGEALLGV
EEECCCEEEEEEECCCCEEEHHHHHHHHHCCCCCCCCEEEEEECCCEEECCCCCCEEEEE
SVSQPPLLKLVPRKILESTGHSVLNGILLGIKSRVQQQLVKDFLEWCELNKF
CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA