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The map label for this gene is 123969174

Identifier: 123969174

GI number: 123969174

Start: 1387965

End: 1388441

Strand: Reverse

Name: 123969174

Synonym: A9601_16421

Alternate gene names: NA

Gene position: 1388441-1387965 (Counterclockwise)

Preceding gene: 123969175

Following gene: 123969171

Centisome position: 83.15

GC content: 36.06

Gene sequence:

>477_bases
ATGACCTCATCAGATAAGTTAAATCAAAATTCAACAGAAAAAAAAGAAAAAAACAGTGATGTACCAAACTCTAAAAATTC
TTCTCCTAATTCAGGAATGATGGGTGCTACAGCTGTGTTGGCAGCTGCCAAAATTGATGAAGATGGTGTACCTACTGGCT
ATACCCCTAAACCTGATGAAGGAAGGTTCATAATTAAAGTATTGTGGTTACCTGATAATGTAGCTTTAGCTGTGGATCAA
ATAGTAGGTGGAGGTCCAAGCCCTCTTACTGCCTATTACTTTTGGCCAAGGGATGATGCTTGGGAAAAATTAAAAAGTGA
ACTTGAGAATAAAGGTTGGATTACAGATAATGAAAGAGTAGAGATATTGAATAAAGCTACTGAAGTGATAAATTACTGGC
AAGAAGAAGGTAAGACAAAAAAATTAGAAGAAGCCAAACTAAAGTTTCCCGAAGTAACTTTTTGTGGAACTGCCTAA

Upstream 100 bases:

>100_bases
TTTTTAGTAGTTATCAATAACTAAAATCAAGAAATTTTGAATAAATCAATCAAAATGTGTCCATAAACTGATAAATTATT
TATTGAACATAAATAAGTGA

Downstream 100 bases:

>100_bases
ATATTAGTTCTTTGCTGCTTGAATCCTAGCTTCAGCCTTTGAAATCTCTTTCAAGGCTTTAATTTTTTCTGGATTTTTTT
CATTTTCAGAAAATTTGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: Ycf65-like protein [H]

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MTSSDKLNQNSTEKKEKNSDVPNSKNSSPNSGMMGATAVLAAAKIDEDGVPTGYTPKPDEGRFIIKVLWLPDNVALAVDQ
IVGGGPSPLTAYYFWPRDDAWEKLKSELENKGWITDNERVEILNKATEVINYWQEEGKTKKLEEAKLKFPEVTFCGTA

Sequences:

>Translated_158_residues
MTSSDKLNQNSTEKKEKNSDVPNSKNSSPNSGMMGATAVLAAAKIDEDGVPTGYTPKPDEGRFIIKVLWLPDNVALAVDQ
IVGGGPSPLTAYYFWPRDDAWEKLKSELENKGWITDNERVEILNKATEVINYWQEEGKTKKLEEAKLKFPEVTFCGTA
>Mature_157_residues
TSSDKLNQNSTEKKEKNSDVPNSKNSSPNSGMMGATAVLAAAKIDEDGVPTGYTPKPDEGRFIIKVLWLPDNVALAVDQI
VGGGPSPLTAYYFWPRDDAWEKLKSELENKGWITDNERVEILNKATEVINYWQEEGKTKKLEEAKLKFPEVTFCGTA

Specific function: Probably a ribosomal protein or a ribosome-associated protein [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PSRP3/ycf65 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006924
- ProDom:   PD015453 [H]

Pfam domain/function: PF04839 PSRP-3_Ycf65 [H]

EC number: NA

Molecular weight: Translated: 17525; Mature: 17394

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSDKLNQNSTEKKEKNSDVPNSKNSSPNSGMMGATAVLAAAKIDEDGVPTGYTPKPDE
CCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
GRFIIKVLWLPDNVALAVDQIVGGGPSPLTAYYFWPRDDAWEKLKSELENKGWITDNERV
CCEEEEEEECCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCHHH
EILNKATEVINYWQEEGKTKKLEEAKLKFPEVTFCGTA
HHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEECCCC
>Mature Secondary Structure 
TSSDKLNQNSTEKKEKNSDVPNSKNSSPNSGMMGATAVLAAAKIDEDGVPTGYTPKPDE
CCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
GRFIIKVLWLPDNVALAVDQIVGGGPSPLTAYYFWPRDDAWEKLKSELENKGWITDNERV
CCEEEEEEECCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCHHH
EILNKATEVINYWQEEGKTKKLEEAKLKFPEVTFCGTA
HHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12917642 [H]