| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
Click here to switch to the map view.
The map label for this gene is 123969153
Identifier: 123969153
GI number: 123969153
Start: 1371017
End: 1371883
Strand: Direct
Name: 123969153
Synonym: A9601_16211
Alternate gene names: NA
Gene position: 1371017-1371883 (Clockwise)
Preceding gene: 123969152
Following gene: 123969157
Centisome position: 82.1
GC content: 29.99
Gene sequence:
>867_bases ATGAAAAAAAACAAAAAGCATATATCTCATGAAATTAATAATTTAAAAAACCTGAATTTAATTATTAATTCTGATACTTA TAAATTGGCTCACGAAGATAATGGTTTACTTAGCCGAAATGAAATGCGTGGAGTTAGGATGCTTCTTGAAATTACGAAAC CAGATTTAATCCTTGAAGAAAATAAAATTCTTTCAACCATAATTATTTTTGGAGGCGCAAGCATTACAGAAGAGTCAAAT ACAAAAAAGAGAATTGAAAATATAAAAGAGTTAATTAAAAAAAATCCTAAATCGATACTTCTAAAACGAAATTTAAATAG ATTAGAAAATTTGCTTATAATGAGTCATTACTATCAATCTGCAAGGGAGTTTTCTAAGCTTGCTTCAATTAATAATCAAA ATAAAAACTGTAATTCGCATGTGATTGTTACAGGTGGGGGGCCAGGAATTATGGAAGCTGCTAATAGAGGTGCATTTGAA GCAAATTGTAAGTCTATAGGGTTAAATATCAGTCTCCCTAATGAACAAATACCAAATGCTTTTATAACTCCCGGTCTTTG CTTTAAATTTAATTATTTTGCATTAAGAAAGATCCATTTTGTTATGCGATCAGTAGCTGCCGTATTTTTTCCTGGAGGTT TTGGAACACTAGATGAATTATTTGAACTATTGACTCTTTGTCAAACAGGAATGAAAACAAAAATCCCAATCATACTTTTT GGTAGAGAGTATTGGAATAAGATAATTAACTTTGAATATTTAGCTGATCTTGGATTAATTGAAGATGAACATTTAAACCT TTTCCAATATGCAGACACGGCATCAGAAGCATGGAAAATTATCAAATCATCAAAAAAGCCAACCTAG
Upstream 100 bases:
>100_bases GCAAGACAAAGTCCTCCTGTTTATTGGATTTACGAAAATAACAAAATCAAAAGAGTCTATTTAAATCCTTTAGAAAGAAA AGTTAAAACTCTTGTTTGAA
Downstream 100 bases:
>100_bases AAAACTATAAGCTGACTTGATAACAAATGTAGAAGAATGATTAATAAGTATTTGATATCTTGTTTTTCATGCTTTCAATC TTATTGATTAATTCATCTAA
Product: dehydrogenase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MKKNKKHISHEINNLKNLNLIINSDTYKLAHEDNGLLSRNEMRGVRMLLEITKPDLILEENKILSTIIIFGGASITEESN TKKRIENIKELIKKNPKSILLKRNLNRLENLLIMSHYYQSAREFSKLASINNQNKNCNSHVIVTGGGPGIMEAANRGAFE ANCKSIGLNISLPNEQIPNAFITPGLCFKFNYFALRKIHFVMRSVAAVFFPGGFGTLDELFELLTLCQTGMKTKIPIILF GREYWNKIINFEYLADLGLIEDEHLNLFQYADTASEAWKIIKSSKKPT
Sequences:
>Translated_288_residues MKKNKKHISHEINNLKNLNLIINSDTYKLAHEDNGLLSRNEMRGVRMLLEITKPDLILEENKILSTIIIFGGASITEESN TKKRIENIKELIKKNPKSILLKRNLNRLENLLIMSHYYQSAREFSKLASINNQNKNCNSHVIVTGGGPGIMEAANRGAFE ANCKSIGLNISLPNEQIPNAFITPGLCFKFNYFALRKIHFVMRSVAAVFFPGGFGTLDELFELLTLCQTGMKTKIPIILF GREYWNKIINFEYLADLGLIEDEHLNLFQYADTASEAWKIIKSSKKPT >Mature_288_residues MKKNKKHISHEINNLKNLNLIINSDTYKLAHEDNGLLSRNEMRGVRMLLEITKPDLILEENKILSTIIIFGGASITEESN TKKRIENIKELIKKNPKSILLKRNLNRLENLLIMSHYYQSAREFSKLASINNQNKNCNSHVIVTGGGPGIMEAANRGAFE ANCKSIGLNISLPNEQIPNAFITPGLCFKFNYFALRKIHFVMRSVAAVFFPGGFGTLDELFELLTLCQTGMKTKIPIILF GREYWNKIINFEYLADLGLIEDEHLNLFQYADTASEAWKIIKSSKKPT
Specific function: Unknown
COG id: COG1611
COG function: function code R; Predicted Rossmann fold nucleotide-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32733; Mature: 32733
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNKKHISHEINNLKNLNLIINSDTYKLAHEDNGLLSRNEMRGVRMLLEITKPDLILEE CCCCHHHHHHHHHCCCEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEC NKILSTIIIFGGASITEESNTKKRIENIKELIKKNPKSILLKRNLNRLENLLIMSHYYQS CHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH AREFSKLASINNQNKNCNSHVIVTGGGPGIMEAANRGAFEANCKSIGLNISLPNEQIPNA HHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHCCCCCCCCHHEEEEEEECCCCCCCCC FITPGLCFKFNYFALRKIHFVMRSVAAVFFPGGFGTLDELFELLTLCQTGMKTKIPIILF CCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEE GREYWNKIINFEYLADLGLIEDEHLNLFQYADTASEAWKIIKSSKKPT CHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKKNKKHISHEINNLKNLNLIINSDTYKLAHEDNGLLSRNEMRGVRMLLEITKPDLILEE CCCCHHHHHHHHHCCCEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEC NKILSTIIIFGGASITEESNTKKRIENIKELIKKNPKSILLKRNLNRLENLLIMSHYYQS CHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH AREFSKLASINNQNKNCNSHVIVTGGGPGIMEAANRGAFEANCKSIGLNISLPNEQIPNA HHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHCCCCCCCCHHEEEEEEECCCCCCCCC FITPGLCFKFNYFALRKIHFVMRSVAAVFFPGGFGTLDELFELLTLCQTGMKTKIPIILF CCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEE GREYWNKIINFEYLADLGLIEDEHLNLFQYADTASEAWKIIKSSKKPT CHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA