| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123969133
Identifier: 123969133
GI number: 123969133
Start: 1361493
End: 1362077
Strand: Reverse
Name: 123969133
Synonym: A9601_16011
Alternate gene names: NA
Gene position: 1362077-1361493 (Counterclockwise)
Preceding gene: 123969134
Following gene: 123969131
Centisome position: 81.57
GC content: 27.01
Gene sequence:
>585_bases GTGGAAAAAATAGAAAATAATTTTCTCTATTTGGTTGTCCTTGGAGGAAGAGTAAAAAAAGCTAATATTGAACTTCATGA TGTTAGATGGGTTGTTGGGTCTAAAATTGAAGATACATACGATACTTTAAGAAAGAATTGGTTTGGATCTTCAAAAGGTT TGCATATCGATAGCTATAAAAAAATACAATATTTAGATGGTTATAAGATAAATCTTCGAAATATTGAAAATTTGAAAATA AACAATAACAAATTTTCTAATAAGAGTAGCACTAAAAAGAATTTATGGTTCGTCAATATTGGAGGCTATGATCCAACTTC TATGCAAGAAAAACATGAGTTTGGATTAGTTATAGCTACAAATAAATTAGAGGCAAAAAATATAGCTAAATCTAAATGGC TTATTGGGTGTAAAAAAAAGCATAAAGATGATCTTGCTTCTTTAGAAACATTAATTAGTTGCGATGATTGTAAACTAATA AAAAAGATAGATAATTGGGCAATAGAATTAACTCAAGATAAAAACTTTATTGAAGAAAAAAATTATCCTGATTGGTATGG ATATCAAAAGATAGATGGGAAATAA
Upstream 100 bases:
>100_bases AGGCTGGTTCAATTAAGATAATCTTTTACTTAGAACAATAATCTGCAAGATAATCTTTGATAATTTAAATTTAAGTCAAA TTAAACTTTATTTCTTAAAA
Downstream 100 bases:
>100_bases TGATTTAAGACTCTTTTAATTGCAAAAGAATTTTGCTTAATGATTTTTATTATTATTTATAATTTTAAATATTTAAAAAG AACTTGATTTTCTTAACAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MEKIENNFLYLVVLGGRVKKANIELHDVRWVVGSKIEDTYDTLRKNWFGSSKGLHIDSYKKIQYLDGYKINLRNIENLKI NNNKFSNKSSTKKNLWFVNIGGYDPTSMQEKHEFGLVIATNKLEAKNIAKSKWLIGCKKKHKDDLASLETLISCDDCKLI KKIDNWAIELTQDKNFIEEKNYPDWYGYQKIDGK
Sequences:
>Translated_194_residues MEKIENNFLYLVVLGGRVKKANIELHDVRWVVGSKIEDTYDTLRKNWFGSSKGLHIDSYKKIQYLDGYKINLRNIENLKI NNNKFSNKSSTKKNLWFVNIGGYDPTSMQEKHEFGLVIATNKLEAKNIAKSKWLIGCKKKHKDDLASLETLISCDDCKLI KKIDNWAIELTQDKNFIEEKNYPDWYGYQKIDGK >Mature_194_residues MEKIENNFLYLVVLGGRVKKANIELHDVRWVVGSKIEDTYDTLRKNWFGSSKGLHIDSYKKIQYLDGYKINLRNIENLKI NNNKFSNKSSTKKNLWFVNIGGYDPTSMQEKHEFGLVIATNKLEAKNIAKSKWLIGCKKKHKDDLASLETLISCDDCKLI KKIDNWAIELTQDKNFIEEKNYPDWYGYQKIDGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22642; Mature: 22642
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKIENNFLYLVVLGGRVKKANIELHDVRWVVGSKIEDTYDTLRKNWFGSSKGLHIDSYK CCCCCCCEEEEEEECCEEEECCEEEEEEEEEECCCCHHHHHHHHHHCCCCCCCEEECCCC KIQYLDGYKINLRNIENLKINNNKFSNKSSTKKNLWFVNIGGYDPTSMQEKHEFGLVIAT EEEEECCEEEEEECCEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHEEEEEEE NKLEAKNIAKSKWLIGCKKKHKDDLASLETLISCDDCKLIKKIDNWAIELTQDKNFIEEK CCCCCHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHCCEEEEEECCCCCHHCC NYPDWYGYQKIDGK CCCCCCCEEECCCC >Mature Secondary Structure MEKIENNFLYLVVLGGRVKKANIELHDVRWVVGSKIEDTYDTLRKNWFGSSKGLHIDSYK CCCCCCCEEEEEEECCEEEECCEEEEEEEEEECCCCHHHHHHHHHHCCCCCCCEEECCCC KIQYLDGYKINLRNIENLKINNNKFSNKSSTKKNLWFVNIGGYDPTSMQEKHEFGLVIAT EEEEECCEEEEEECCEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHEEEEEEE NKLEAKNIAKSKWLIGCKKKHKDDLASLETLISCDDCKLIKKIDNWAIELTQDKNFIEEK CCCCCHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHCCEEEEEECCCCCHHCC NYPDWYGYQKIDGK CCCCCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA