| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123969132
Identifier: 123969132
GI number: 123969132
Start: 1360215
End: 1361420
Strand: Direct
Name: 123969132
Synonym: A9601_16001
Alternate gene names: NA
Gene position: 1360215-1361420 (Clockwise)
Preceding gene: 123969129
Following gene: 123969137
Centisome position: 81.46
GC content: 30.68
Gene sequence:
>1206_bases TTGAAACTTTCAAATAAATCACTAATTAAATCAACTATTAATAAATTAATTAGTCCTTGGTATTCAATACCTCTAATCGA TAGATGGTTACTTGGGCAAATAATACCCCCTATGTTATTTGCTATTTCTGCTTTTACTGTTATCTCATTATCTGTTGGGG TAATGTTCGATCTAATAAGGAAAATAGTTGAGTATGGTTTACCACTTTTTCTAGCGTTAAAAGTTCTCTTTTTTAGCTTA CCAAGCTTTCTAGTGTTGTCATTCCCGATGGCAGTTTTACTCTCTACTTTATTAGCCTATGGAAAGTTATCAAGCAATTC TGAATTATTAGCACTGAAATCATTGGGAATAAAAACTTCAAGAATTATTTCTCCAGCTATCGCTCTTTCAATATTTATGA CAGGATTAACTTTTTACTTTAACGATAATTTAGTTCCCAAAAGTAACAAGTTAGCTGAAACAACATTAAGAGCAGGGATA GGAAGTTCTTTCAGCGAAGAAAAAGGAAAAGAAAACATTATGTTTTCAAGATATGGATCCAGAATAAATTCCGAAACTAA AAAACCAACAAAAAATAATTCTAAACTCACTCATATTTTTTATTCCCAATGGTATGAAAACAAGATCATGAAAAACGTTA CAGTATTAGATTTTTCCAGAGAAGATTTTCAACAAATTTTAAAAGCAAACTCTGGAAGATTTGACAAAAAAAGTTCTTCT TGGATTTTTTCTAACGGGAGTATTGTATCAATTGATTCAGGTGGACAAACTACAAATATTCAATTTAAAGAATATAAATA TCCATTTGTGGAAGGACCCATGGAGTTAGCAAAAGTACCTAAGGATGCCAATGAAATGACTTTAAAGCAGGCTATACAAG CAGAAAAAATTTATAAAAAAACTGGAAACTTGAAAGAGGTTAGAAGAATGAAAGTCCGCATTCAAGAAAAATTTACTCTA CCTTTTGCATGCTTGGTCTTTGGTTTAATAGGAAGCAGTCTGGGATCTAAATCTAATTTAAGATCTTCAAAAAGCCAGGG ATTTGGATTGAGCGTAATTCTTATATTAATTTATTATGTAATGTCATTTATATTTAGTTCCTTCGGAGTAAAAGGTATTT TACCTCCAATTTTTGCTGCATGGTTACCTGTCTTAATTTCTCTGGGAGGTGGAATTTATTTGTTAAGAAAATCAAGTTCT TTTTAA
Upstream 100 bases:
>100_bases ACTAAATTAAAAATTTTTTTTATGCAAATTTTATATTGTTTTATAAAACATTGATATTTTATAATGCTGGGAAAGGTAGC ACAAATTAAATAAATTTCTT
Downstream 100 bases:
>100_bases ATATTTAAAATTATAAATAATAATAAAAATCATTAAGCAAAATTCTTTTGCAATTAAAAGAGTCTTAAATCATTATTTCC CATCTATCTTTTGATATCCA
Product: putative permease
Products: NA
Alternate protein names: Permease; Permease YjgP/YjgQ; Permease YjgP/YjgQ Family; Unclassified ABC-Type Transport System Permease; YjgP/YjgQ Family Protein; Permease Family Protein; YjgP/YjgQ Permease Superfamily; YjgP/YjgQ Permease; YjgP/YjgQ Family Membrane Protein
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MKLSNKSLIKSTINKLISPWYSIPLIDRWLLGQIIPPMLFAISAFTVISLSVGVMFDLIRKIVEYGLPLFLALKVLFFSL PSFLVLSFPMAVLLSTLLAYGKLSSNSELLALKSLGIKTSRIISPAIALSIFMTGLTFYFNDNLVPKSNKLAETTLRAGI GSSFSEEKGKENIMFSRYGSRINSETKKPTKNNSKLTHIFYSQWYENKIMKNVTVLDFSREDFQQILKANSGRFDKKSSS WIFSNGSIVSIDSGGQTTNIQFKEYKYPFVEGPMELAKVPKDANEMTLKQAIQAEKIYKKTGNLKEVRRMKVRIQEKFTL PFACLVFGLIGSSLGSKSNLRSSKSQGFGLSVILILIYYVMSFIFSSFGVKGILPPIFAAWLPVLISLGGGIYLLRKSSS F
Sequences:
>Translated_401_residues MKLSNKSLIKSTINKLISPWYSIPLIDRWLLGQIIPPMLFAISAFTVISLSVGVMFDLIRKIVEYGLPLFLALKVLFFSL PSFLVLSFPMAVLLSTLLAYGKLSSNSELLALKSLGIKTSRIISPAIALSIFMTGLTFYFNDNLVPKSNKLAETTLRAGI GSSFSEEKGKENIMFSRYGSRINSETKKPTKNNSKLTHIFYSQWYENKIMKNVTVLDFSREDFQQILKANSGRFDKKSSS WIFSNGSIVSIDSGGQTTNIQFKEYKYPFVEGPMELAKVPKDANEMTLKQAIQAEKIYKKTGNLKEVRRMKVRIQEKFTL PFACLVFGLIGSSLGSKSNLRSSKSQGFGLSVILILIYYVMSFIFSSFGVKGILPPIFAAWLPVLISLGGGIYLLRKSSS F >Mature_401_residues MKLSNKSLIKSTINKLISPWYSIPLIDRWLLGQIIPPMLFAISAFTVISLSVGVMFDLIRKIVEYGLPLFLALKVLFFSL PSFLVLSFPMAVLLSTLLAYGKLSSNSELLALKSLGIKTSRIISPAIALSIFMTGLTFYFNDNLVPKSNKLAETTLRAGI GSSFSEEKGKENIMFSRYGSRINSETKKPTKNNSKLTHIFYSQWYENKIMKNVTVLDFSREDFQQILKANSGRFDKKSSS WIFSNGSIVSIDSGGQTTNIQFKEYKYPFVEGPMELAKVPKDANEMTLKQAIQAEKIYKKTGNLKEVRRMKVRIQEKFTL PFACLVFGLIGSSLGSKSNLRSSKSQGFGLSVILILIYYVMSFIFSSFGVKGILPPIFAAWLPVLISLGGGIYLLRKSSS F
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44832; Mature: 44832
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLSNKSLIKSTINKLISPWYSIPLIDRWLLGQIIPPMLFAISAFTVISLSVGVMFDLIR CCCCHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIVEYGLPLFLALKVLFFSLPSFLVLSFPMAVLLSTLLAYGKLSSNSELLALKSLGIKTS HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHCCCCHH RIISPAIALSIFMTGLTFYFNDNLVPKSNKLAETTLRAGIGSSFSEEKGKENIMFSRYGS HHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHCCCCCHHHCCCCCCHHHHHCC RINSETKKPTKNNSKLTHIFYSQWYENKIMKNVTVLDFSREDFQQILKANSGRFDKKSSS HHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHCCCCCCCCCCCC WIFSNGSIVSIDSGGQTTNIQFKEYKYPFVEGPMELAKVPKDANEMTLKQAIQAEKIYKK EEEECCCEEEECCCCCEECEEEEECCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHH TGNLKEVRRMKVRIQEKFTLPFACLVFGLIGSSLGSKSNLRSSKSQGFGLSVILILIYYV CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHHHHHH MSFIFSSFGVKGILPPIFAAWLPVLISLGGGIYLLRKSSSF HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC >Mature Secondary Structure MKLSNKSLIKSTINKLISPWYSIPLIDRWLLGQIIPPMLFAISAFTVISLSVGVMFDLIR CCCCHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIVEYGLPLFLALKVLFFSLPSFLVLSFPMAVLLSTLLAYGKLSSNSELLALKSLGIKTS HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHCCCCHH RIISPAIALSIFMTGLTFYFNDNLVPKSNKLAETTLRAGIGSSFSEEKGKENIMFSRYGS HHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHCCCCCHHHCCCCCCHHHHHCC RINSETKKPTKNNSKLTHIFYSQWYENKIMKNVTVLDFSREDFQQILKANSGRFDKKSSS HHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHCCCCCCCCCCCC WIFSNGSIVSIDSGGQTTNIQFKEYKYPFVEGPMELAKVPKDANEMTLKQAIQAEKIYKK EEEECCCEEEECCCCCEECEEEEECCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHH TGNLKEVRRMKVRIQEKFTLPFACLVFGLIGSSLGSKSNLRSSKSQGFGLSVILILIYYV CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHHHHHH MSFIFSSFGVKGILPPIFAAWLPVLISLGGGIYLLRKSSSF HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA