Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

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The map label for this gene is 123969132

Identifier: 123969132

GI number: 123969132

Start: 1360215

End: 1361420

Strand: Direct

Name: 123969132

Synonym: A9601_16001

Alternate gene names: NA

Gene position: 1360215-1361420 (Clockwise)

Preceding gene: 123969129

Following gene: 123969137

Centisome position: 81.46

GC content: 30.68

Gene sequence:

>1206_bases
TTGAAACTTTCAAATAAATCACTAATTAAATCAACTATTAATAAATTAATTAGTCCTTGGTATTCAATACCTCTAATCGA
TAGATGGTTACTTGGGCAAATAATACCCCCTATGTTATTTGCTATTTCTGCTTTTACTGTTATCTCATTATCTGTTGGGG
TAATGTTCGATCTAATAAGGAAAATAGTTGAGTATGGTTTACCACTTTTTCTAGCGTTAAAAGTTCTCTTTTTTAGCTTA
CCAAGCTTTCTAGTGTTGTCATTCCCGATGGCAGTTTTACTCTCTACTTTATTAGCCTATGGAAAGTTATCAAGCAATTC
TGAATTATTAGCACTGAAATCATTGGGAATAAAAACTTCAAGAATTATTTCTCCAGCTATCGCTCTTTCAATATTTATGA
CAGGATTAACTTTTTACTTTAACGATAATTTAGTTCCCAAAAGTAACAAGTTAGCTGAAACAACATTAAGAGCAGGGATA
GGAAGTTCTTTCAGCGAAGAAAAAGGAAAAGAAAACATTATGTTTTCAAGATATGGATCCAGAATAAATTCCGAAACTAA
AAAACCAACAAAAAATAATTCTAAACTCACTCATATTTTTTATTCCCAATGGTATGAAAACAAGATCATGAAAAACGTTA
CAGTATTAGATTTTTCCAGAGAAGATTTTCAACAAATTTTAAAAGCAAACTCTGGAAGATTTGACAAAAAAAGTTCTTCT
TGGATTTTTTCTAACGGGAGTATTGTATCAATTGATTCAGGTGGACAAACTACAAATATTCAATTTAAAGAATATAAATA
TCCATTTGTGGAAGGACCCATGGAGTTAGCAAAAGTACCTAAGGATGCCAATGAAATGACTTTAAAGCAGGCTATACAAG
CAGAAAAAATTTATAAAAAAACTGGAAACTTGAAAGAGGTTAGAAGAATGAAAGTCCGCATTCAAGAAAAATTTACTCTA
CCTTTTGCATGCTTGGTCTTTGGTTTAATAGGAAGCAGTCTGGGATCTAAATCTAATTTAAGATCTTCAAAAAGCCAGGG
ATTTGGATTGAGCGTAATTCTTATATTAATTTATTATGTAATGTCATTTATATTTAGTTCCTTCGGAGTAAAAGGTATTT
TACCTCCAATTTTTGCTGCATGGTTACCTGTCTTAATTTCTCTGGGAGGTGGAATTTATTTGTTAAGAAAATCAAGTTCT
TTTTAA

Upstream 100 bases:

>100_bases
ACTAAATTAAAAATTTTTTTTATGCAAATTTTATATTGTTTTATAAAACATTGATATTTTATAATGCTGGGAAAGGTAGC
ACAAATTAAATAAATTTCTT

Downstream 100 bases:

>100_bases
ATATTTAAAATTATAAATAATAATAAAAATCATTAAGCAAAATTCTTTTGCAATTAAAAGAGTCTTAAATCATTATTTCC
CATCTATCTTTTGATATCCA

Product: putative permease

Products: NA

Alternate protein names: Permease; Permease YjgP/YjgQ; Permease YjgP/YjgQ Family; Unclassified ABC-Type Transport System Permease; YjgP/YjgQ Family Protein; Permease Family Protein; YjgP/YjgQ Permease Superfamily; YjgP/YjgQ Permease; YjgP/YjgQ Family Membrane Protein

Number of amino acids: Translated: 401; Mature: 401

Protein sequence:

>401_residues
MKLSNKSLIKSTINKLISPWYSIPLIDRWLLGQIIPPMLFAISAFTVISLSVGVMFDLIRKIVEYGLPLFLALKVLFFSL
PSFLVLSFPMAVLLSTLLAYGKLSSNSELLALKSLGIKTSRIISPAIALSIFMTGLTFYFNDNLVPKSNKLAETTLRAGI
GSSFSEEKGKENIMFSRYGSRINSETKKPTKNNSKLTHIFYSQWYENKIMKNVTVLDFSREDFQQILKANSGRFDKKSSS
WIFSNGSIVSIDSGGQTTNIQFKEYKYPFVEGPMELAKVPKDANEMTLKQAIQAEKIYKKTGNLKEVRRMKVRIQEKFTL
PFACLVFGLIGSSLGSKSNLRSSKSQGFGLSVILILIYYVMSFIFSSFGVKGILPPIFAAWLPVLISLGGGIYLLRKSSS
F

Sequences:

>Translated_401_residues
MKLSNKSLIKSTINKLISPWYSIPLIDRWLLGQIIPPMLFAISAFTVISLSVGVMFDLIRKIVEYGLPLFLALKVLFFSL
PSFLVLSFPMAVLLSTLLAYGKLSSNSELLALKSLGIKTSRIISPAIALSIFMTGLTFYFNDNLVPKSNKLAETTLRAGI
GSSFSEEKGKENIMFSRYGSRINSETKKPTKNNSKLTHIFYSQWYENKIMKNVTVLDFSREDFQQILKANSGRFDKKSSS
WIFSNGSIVSIDSGGQTTNIQFKEYKYPFVEGPMELAKVPKDANEMTLKQAIQAEKIYKKTGNLKEVRRMKVRIQEKFTL
PFACLVFGLIGSSLGSKSNLRSSKSQGFGLSVILILIYYVMSFIFSSFGVKGILPPIFAAWLPVLISLGGGIYLLRKSSS
F
>Mature_401_residues
MKLSNKSLIKSTINKLISPWYSIPLIDRWLLGQIIPPMLFAISAFTVISLSVGVMFDLIRKIVEYGLPLFLALKVLFFSL
PSFLVLSFPMAVLLSTLLAYGKLSSNSELLALKSLGIKTSRIISPAIALSIFMTGLTFYFNDNLVPKSNKLAETTLRAGI
GSSFSEEKGKENIMFSRYGSRINSETKKPTKNNSKLTHIFYSQWYENKIMKNVTVLDFSREDFQQILKANSGRFDKKSSS
WIFSNGSIVSIDSGGQTTNIQFKEYKYPFVEGPMELAKVPKDANEMTLKQAIQAEKIYKKTGNLKEVRRMKVRIQEKFTL
PFACLVFGLIGSSLGSKSNLRSSKSQGFGLSVILILIYYVMSFIFSSFGVKGILPPIFAAWLPVLISLGGGIYLLRKSSS
F

Specific function: Unknown

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44832; Mature: 44832

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSNKSLIKSTINKLISPWYSIPLIDRWLLGQIIPPMLFAISAFTVISLSVGVMFDLIR
CCCCHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KIVEYGLPLFLALKVLFFSLPSFLVLSFPMAVLLSTLLAYGKLSSNSELLALKSLGIKTS
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHCCCCHH
RIISPAIALSIFMTGLTFYFNDNLVPKSNKLAETTLRAGIGSSFSEEKGKENIMFSRYGS
HHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHCCCCCHHHCCCCCCHHHHHCC
RINSETKKPTKNNSKLTHIFYSQWYENKIMKNVTVLDFSREDFQQILKANSGRFDKKSSS
HHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHCCCCCCCCCCCC
WIFSNGSIVSIDSGGQTTNIQFKEYKYPFVEGPMELAKVPKDANEMTLKQAIQAEKIYKK
EEEECCCEEEECCCCCEECEEEEECCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHH
TGNLKEVRRMKVRIQEKFTLPFACLVFGLIGSSLGSKSNLRSSKSQGFGLSVILILIYYV
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHHHHHH
MSFIFSSFGVKGILPPIFAAWLPVLISLGGGIYLLRKSSSF
HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC
>Mature Secondary Structure
MKLSNKSLIKSTINKLISPWYSIPLIDRWLLGQIIPPMLFAISAFTVISLSVGVMFDLIR
CCCCHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KIVEYGLPLFLALKVLFFSLPSFLVLSFPMAVLLSTLLAYGKLSSNSELLALKSLGIKTS
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHCCCCHH
RIISPAIALSIFMTGLTFYFNDNLVPKSNKLAETTLRAGIGSSFSEEKGKENIMFSRYGS
HHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHCCCCCHHHCCCCCCHHHHHCC
RINSETKKPTKNNSKLTHIFYSQWYENKIMKNVTVLDFSREDFQQILKANSGRFDKKSSS
HHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHCCCCCCCCCCCC
WIFSNGSIVSIDSGGQTTNIQFKEYKYPFVEGPMELAKVPKDANEMTLKQAIQAEKIYKK
EEEECCCEEEECCCCCEECEEEEECCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHH
TGNLKEVRRMKVRIQEKFTLPFACLVFGLIGSSLGSKSNLRSSKSQGFGLSVILILIYYV
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHHHHHH
MSFIFSSFGVKGILPPIFAAWLPVLISLGGGIYLLRKSSSF
HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA