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The map label for this gene is 123969104

Identifier: 123969104

GI number: 123969104

Start: 1345543

End: 1346292

Strand: Reverse

Name: 123969104

Synonym: A9601_15721

Alternate gene names: NA

Gene position: 1346292-1345543 (Counterclockwise)

Preceding gene: 123969105

Following gene: 123969103

Centisome position: 80.62

GC content: 31.2

Gene sequence:

>750_bases
ATGCAGAATCTTGTATCAAAAAAAGAAGAAGAGGAAAGAAGATTAAAAGCTTTAGCAGAATATAGGATTTTGGGAACCAA
GCCAGAATCATGTTATGACGATATTACAAAAATTGCTGCTACTACTTGTAATGTGCCTATTTCTTTAATGACTTTGGTTG
ACAAAGATAAACAGTGGTTTAAATCCAAAATAGGACTTCAAATATCAGAAACTAGAAGAGATTGGTCTTTTTGTACACAT
GCAATAAAAGAAAATAGTCCATTAATTATTCATGATGCTTTCCAAGATGAAAGATTTATAAATAATCCATTGGTAACTGG
AGATCCAAAGATTCGTTTTTATGCAGGTTTTCCTCTTAGAAATAGTGATGGTAATAAGCTTGGAACTCTGTGTGTAATAG
ACAGAAAGCCAGGAAATCTTACTACACAACAATTTAATATTATGGAATTATTATCCAAGCAAATAGTTTCATTTTTAGAG
CTTAGAAAAAAGTCATTAAATTTGCTAGACGCTTTATCTAATTTGCATAAACAGGAAGGGATTTTATCTGTATGTTCATA
TTGCAGAGAAGTGAAAAATAAGGAGGGCGACTGGATGCATTTAGAAAAATATCTTTCCAAAATTAGTGATATTAGATTCA
GTCATGGGGTTTGTGATAATTGTATGGAAAAACATTTCCCAGATGTAATTGAAGTGTGGAATAAAAAGGATTTTTTTGAA
GACGGCCAAAAAAGGTTTTTAGATTCCTAG

Upstream 100 bases:

>100_bases
TAACAAATCAATAAGTTTATCTTTTTTTTATTAAGTATTAGAGGGAAAAAGTTTTTTGGAGAAACTTTAATTTTAAAGTT
TTAATTATTGGTGAAGATTA

Downstream 100 bases:

>100_bases
AATCAAAAACTTGCTTTTTATTGTTTAATCTATTTTCTAAACAAATTCTTTATTTGGTGGTTAGTATTGTATAAATTTTG
ACTAGAAAATGTTATTAGGA

Product: GAF domain-containing protein

Products: NA

Alternate protein names: Diguanylate Cyclase With GAF Sensor; Diguanylate Cyclase; Multi-Sensor Hybrid Histidine Kinase; Two-Component Hybrid Sensor And Regulator; GAF Sensor Protein; Multi-Sensor Signal Transduction Histidine Kinase; GGDEF Domain-Containing Protein; Diguanylate Cyclase With PAS/PAC Sensor; Sensor Protein; GAF Domain-Containing Protein; Two-Component System Sensor Histidine Kinase; Histidine Kinase Response Regulator Hybrid Protein; Two-Component Sensor Histidine Kinase; PAS Sensor Protein; Histidine Kinase-Response Regulator Hybrid Protein; GGDEF Domain Protein; GAF Sensor Signal Transduction Histidine Kinase; PAS Fold Family; Diguanylate Cyclase With PAS/PAC And GAF Sensors; Sensory Box/GGDEF Family Protein; Histidine Kinase/Response Regulator Hybrid Protein; Sensor Histidine Kinase; GAF Sensor Hybrid Histidine Kinase; GAF Sensor Diguanylate Cyclase; GAF Domain/GGDEF Domain/EAL Domain-Containing Protein; Phytochrome Sensor Protein; Diguanylate Phosphodiesterase With GAF Sensor; Sensory Transduction Histidine Kinase; PAS/PAC Sensor Protein; ATPase Histidine Kinase- DNA Gyrase B- And; Response Regulator Receiver Domain Protein; HWE Histidine Kinase; GAF Sensor-Containing Diguanylate Cyclase; Pas/Pac Sensor Protein; Stage II Sporulation E Family Protein; GGDEF GAF Signalling Protein; Sensory Histidine Protein Kinase; Diguanylate Cyclase/Phosphodiesterase With GAF Sensor; GAF Domain/GGDEF Domain Protein; Two Component System Sensor Protein; Sensory Box Histidine Kinase/Response Regulator; Protein Containing GAF Domain; GAF Domain Protein; Adenylate Cyclase; Sensor Histidine Kinase/GAF Domain-Containing Protein; Histidine Kinase Of HWE Family; GAF/PAS-Family Sensor Histidine Kinase; Two-Component System Sensor Kinase; GAF And Chase3 Sensor Phosphotransfer Protein; FOG GGDEF Domain Protein; Serine/Threonine Protein Kinase; Cyclic Diguanylate Phosphodiesterase/Diguanylate Cyclase; Diguanylate-Cyclase; Signaling Protein; Gaf Sensor Signal Transduction Histidine Kinase; GGDEF And GAF Signalling Protein; Phosphodiesterase; GGDEF Family Protein; Sensor Kinase Protein

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MQNLVSKKEEEERRLKALAEYRILGTKPESCYDDITKIAATTCNVPISLMTLVDKDKQWFKSKIGLQISETRRDWSFCTH
AIKENSPLIIHDAFQDERFINNPLVTGDPKIRFYAGFPLRNSDGNKLGTLCVIDRKPGNLTTQQFNIMELLSKQIVSFLE
LRKKSLNLLDALSNLHKQEGILSVCSYCREVKNKEGDWMHLEKYLSKISDIRFSHGVCDNCMEKHFPDVIEVWNKKDFFE
DGQKRFLDS

Sequences:

>Translated_249_residues
MQNLVSKKEEEERRLKALAEYRILGTKPESCYDDITKIAATTCNVPISLMTLVDKDKQWFKSKIGLQISETRRDWSFCTH
AIKENSPLIIHDAFQDERFINNPLVTGDPKIRFYAGFPLRNSDGNKLGTLCVIDRKPGNLTTQQFNIMELLSKQIVSFLE
LRKKSLNLLDALSNLHKQEGILSVCSYCREVKNKEGDWMHLEKYLSKISDIRFSHGVCDNCMEKHFPDVIEVWNKKDFFE
DGQKRFLDS
>Mature_249_residues
MQNLVSKKEEEERRLKALAEYRILGTKPESCYDDITKIAATTCNVPISLMTLVDKDKQWFKSKIGLQISETRRDWSFCTH
AIKENSPLIIHDAFQDERFINNPLVTGDPKIRFYAGFPLRNSDGNKLGTLCVIDRKPGNLTTQQFNIMELLSKQIVSFLE
LRKKSLNLLDALSNLHKQEGILSVCSYCREVKNKEGDWMHLEKYLSKISDIRFSHGVCDNCMEKHFPDVIEVWNKKDFFE
DGQKRFLDS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28900; Mature: 28900

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNLVSKKEEEERRLKALAEYRILGTKPESCYDDITKIAATTCNVPISLMTLVDKDKQWF
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
KSKIGLQISETRRDWSFCTHAIKENSPLIIHDAFQDERFINNPLVTGDPKIRFYAGFPLR
HHHHCCEEHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCCCCCCCCEEEEECCCEE
NSDGNKLGTLCVIDRKPGNLTTQQFNIMELLSKQIVSFLELRKKSLNLLDALSNLHKQEG
CCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILSVCSYCREVKNKEGDWMHLEKYLSKISDIRFSHGVCDNCMEKHFPDVIEVWNKKDFFE
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHCCHHHHH
DGQKRFLDS
HHHHHHCCC
>Mature Secondary Structure
MQNLVSKKEEEERRLKALAEYRILGTKPESCYDDITKIAATTCNVPISLMTLVDKDKQWF
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
KSKIGLQISETRRDWSFCTHAIKENSPLIIHDAFQDERFINNPLVTGDPKIRFYAGFPLR
HHHHCCEEHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCCCCCCCCEEEEECCCEE
NSDGNKLGTLCVIDRKPGNLTTQQFNIMELLSKQIVSFLELRKKSLNLLDALSNLHKQEG
CCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILSVCSYCREVKNKEGDWMHLEKYLSKISDIRFSHGVCDNCMEKHFPDVIEVWNKKDFFE
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHCCHHHHH
DGQKRFLDS
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA