| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123969091
Identifier: 123969091
GI number: 123969091
Start: 1336503
End: 1337054
Strand: Direct
Name: 123969091
Synonym: A9601_15591
Alternate gene names: NA
Gene position: 1336503-1337054 (Clockwise)
Preceding gene: 123969090
Following gene: 123969092
Centisome position: 80.04
GC content: 30.98
Gene sequence:
>552_bases ATGCCTGATAACAACTTACCCAGTTGGAGGCAAGATTTAAAATCTTCAAGAAAAAAAGAGGGCAAATCGCCCTCTAATAG ATGGATACAGCTTGCAACAGTCAGCGAAGAAAATGAGCCAAGATTAAGAACAGTTGTTTTCAGAGGATGGCATAAAGATA GTTCAATGATTATTTTTACAGATAGAAGAAGTGAAAAAATTGGGCATTTAAAATCTAACCCTAATGCAGAAATATTATGG TTCTTTTTGAAAACCAAATCACAATATAGATTCAAAGGAAAAATATATGAATTAAGTGATGACAAAAATTATTGGGATTT ATTATCAGAAAAATCAAAATCGTCTTGGTTTTGGGGATCTCCTGGAGAGAAAATAAACCCAAAAGTCCAATCTAGTTGTG AAATATTATCCAATCTACCCAAGTCAGAAAATTTTGTAGTTCTAAATTTTAAAATCGATTCAGTGGATCTTCTTAAATTA GAACAGCCTGTTCATAAACGATATATTTGGGAAAAGATTAAAAAATGGGAAAAAGTTGAAATTAATCCTTAA
Upstream 100 bases:
>100_bases GTTTTTCTACCAAGAATGATAAAAAAAGATAAATCGCTCTCAAAATATGATTCATTCGAAGAATACAAAAAGAAAAGTGG TTTTATATTGCCTAAATTAA
Downstream 100 bases:
>100_bases ATATTTCTAAATTGTATATTTAGGTTGAAAAACATATTGTGATCAGTCAGTTTTAAAAAAGAAGTATTATTAATATGAAT TTCTCAGAAATTCCAGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Pyridoxamine Phosphate Oxidase
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MPDNNLPSWRQDLKSSRKKEGKSPSNRWIQLATVSEENEPRLRTVVFRGWHKDSSMIIFTDRRSEKIGHLKSNPNAEILW FFLKTKSQYRFKGKIYELSDDKNYWDLLSEKSKSSWFWGSPGEKINPKVQSSCEILSNLPKSENFVVLNFKIDSVDLLKL EQPVHKRYIWEKIKKWEKVEINP
Sequences:
>Translated_183_residues MPDNNLPSWRQDLKSSRKKEGKSPSNRWIQLATVSEENEPRLRTVVFRGWHKDSSMIIFTDRRSEKIGHLKSNPNAEILW FFLKTKSQYRFKGKIYELSDDKNYWDLLSEKSKSSWFWGSPGEKINPKVQSSCEILSNLPKSENFVVLNFKIDSVDLLKL EQPVHKRYIWEKIKKWEKVEINP >Mature_182_residues PDNNLPSWRQDLKSSRKKEGKSPSNRWIQLATVSEENEPRLRTVVFRGWHKDSSMIIFTDRRSEKIGHLKSNPNAEILWF FLKTKSQYRFKGKIYELSDDKNYWDLLSEKSKSSWFWGSPGEKINPKVQSSCEILSNLPKSENFVVLNFKIDSVDLLKLE QPVHKRYIWEKIKKWEKVEINP
Specific function: Unknown
COG id: COG5135
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21758; Mature: 21627
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDNNLPSWRQDLKSSRKKEGKSPSNRWIQLATVSEENEPRLRTVVFRGWHKDSSMIIFT CCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCEEEEE DRRSEKIGHLKSNPNAEILWFFLKTKSQYRFKGKIYELSDDKNYWDLLSEKSKSSWFWGS CCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEEECCCCCHHHHHHCCCCCCEECCC PGEKINPKVQSSCEILSNLPKSENFVVLNFKIDSVDLLKLEQPVHKRYIWEKIKKWEKVE CCCCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCEEEEHHHHHHHHHHHHHHHCCCCEEE INP CCC >Mature Secondary Structure PDNNLPSWRQDLKSSRKKEGKSPSNRWIQLATVSEENEPRLRTVVFRGWHKDSSMIIFT CCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCEEEEE DRRSEKIGHLKSNPNAEILWFFLKTKSQYRFKGKIYELSDDKNYWDLLSEKSKSSWFWGS CCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEEECCCCCHHHHHHCCCCCCEECCC PGEKINPKVQSSCEILSNLPKSENFVVLNFKIDSVDLLKLEQPVHKRYIWEKIKKWEKVE CCCCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCEEEEHHHHHHHHHHHHHHHCCCCEEE INP CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA