| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123969063
Identifier: 123969063
GI number: 123969063
Start: 1310979
End: 1311590
Strand: Direct
Name: 123969063
Synonym: A9601_15311
Alternate gene names: NA
Gene position: 1310979-1311590 (Clockwise)
Preceding gene: 123969059
Following gene: 123969064
Centisome position: 78.51
GC content: 28.92
Gene sequence:
>612_bases TTGGAAAAATTTAACGTAAATAATATTTCAAACCAAAATAGACAATTTGAATTATTTGGTTCTAATGTAAATACATCAAT TAATTTTCAGCACTCAAATAATCTAAAAATCAAAGGCGAAATCCTAACTGAATGGAGAAATAGAATATACAATCACCAAT TCAAAATTTCAAAAGACACACACAATAAAATTTTGCGCCAAACAAGTCTTCCTATAAATACAATTTCCAATGAAATAAAA ATTGATCCTTTTTCCTTGCAGCCATTATCATTGAACTTTTGGAGAACCAATCAATATATACATAATGGTCCAGCAATGTA TTTTGTAATTGACTCGATGGATAATTCTAAAATAATCCTTTATATAGGAGAAACAAATTCAGCAAATAAAAGATGGAAGG GAGAACATGACTGTAAAAATTACCTCATAAACTATAAAGAAGCCCTAGCTCATAACAAACTCTCAAGTCATCAAGATATT CGTTTTTTCTTAGATGTACCCAAAGAAGTAAAATTAAGACGTAAATTAGAACAGCAACTGATATATTTATGGTTACCACC TTTTAATAAAGAAACTCGAGATAGGTGGGCAACTACTTTCACAAACAACTAA
Upstream 100 bases:
>100_bases TCTTTTAAATTGATTAGAACATTAATAAATTTTAGTTTATAAATAATTCTTTGATTTATATTTTTTCATAATTAAATTTA GTAGAGATGTTTCATAAATA
Downstream 100 bases:
>100_bases AAGTTAATTAAATCCATTTAACAAATGCAATTTTCCACATTCCAAACAAATCTAGATAACTGGCAAGGTGCTTCATTAAT TTTTGGAGTTCTAGAGGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MEKFNVNNISNQNRQFELFGSNVNTSINFQHSNNLKIKGEILTEWRNRIYNHQFKISKDTHNKILRQTSLPINTISNEIK IDPFSLQPLSLNFWRTNQYIHNGPAMYFVIDSMDNSKIILYIGETNSANKRWKGEHDCKNYLINYKEALAHNKLSSHQDI RFFLDVPKEVKLRRKLEQQLIYLWLPPFNKETRDRWATTFTNN
Sequences:
>Translated_203_residues MEKFNVNNISNQNRQFELFGSNVNTSINFQHSNNLKIKGEILTEWRNRIYNHQFKISKDTHNKILRQTSLPINTISNEIK IDPFSLQPLSLNFWRTNQYIHNGPAMYFVIDSMDNSKIILYIGETNSANKRWKGEHDCKNYLINYKEALAHNKLSSHQDI RFFLDVPKEVKLRRKLEQQLIYLWLPPFNKETRDRWATTFTNN >Mature_203_residues MEKFNVNNISNQNRQFELFGSNVNTSINFQHSNNLKIKGEILTEWRNRIYNHQFKISKDTHNKILRQTSLPINTISNEIK IDPFSLQPLSLNFWRTNQYIHNGPAMYFVIDSMDNSKIILYIGETNSANKRWKGEHDCKNYLINYKEALAHNKLSSHQDI RFFLDVPKEVKLRRKLEQQLIYLWLPPFNKETRDRWATTFTNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24249; Mature: 24249
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKFNVNNISNQNRQFELFGSNVNTSINFQHSNNLKIKGEILTEWRNRIYNHQFKISKDT CCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCEEEEHHHHHHHHHHHCCCEEEEECCH HNKILRQTSLPINTISNEIKIDPFSLQPLSLNFWRTNQYIHNGPAMYFVIDSMDNSKIIL HHHHHHHCCCCHHHCCCEEEECCEECCCEEEEEEECCCEEECCCEEEEEEECCCCCEEEE YIGETNSANKRWKGEHDCKNYLINYKEALAHNKLSSHQDIRFFLDVPKEVKLRRKLEQQL EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHCE IYLWLPPFNKETRDRWATTFTNN EEEEECCCCCCCHHHEEEEECCC >Mature Secondary Structure MEKFNVNNISNQNRQFELFGSNVNTSINFQHSNNLKIKGEILTEWRNRIYNHQFKISKDT CCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCEEEEHHHHHHHHHHHCCCEEEEECCH HNKILRQTSLPINTISNEIKIDPFSLQPLSLNFWRTNQYIHNGPAMYFVIDSMDNSKIIL HHHHHHHCCCCHHHCCCEEEECCEECCCEEEEEEECCCEEECCCEEEEEEECCCCCEEEE YIGETNSANKRWKGEHDCKNYLINYKEALAHNKLSSHQDIRFFLDVPKEVKLRRKLEQQL EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHCE IYLWLPPFNKETRDRWATTFTNN EEEEECCCCCCCHHHEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA