| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
Click here to switch to the map view.
The map label for this gene is 123969057
Identifier: 123969057
GI number: 123969057
Start: 1306466
End: 1306882
Strand: Direct
Name: 123969057
Synonym: A9601_15251
Alternate gene names: NA
Gene position: 1306466-1306882 (Clockwise)
Preceding gene: 123969056
Following gene: 123969058
Centisome position: 78.24
GC content: 27.58
Gene sequence:
>417_bases TTGGATAATCCTATGTTTAAAACTAAGTCAAAAAAAGAGGAACCAGTAATAATATCTCCATCATTTCAGTTACCAATCAT TCTAATAGTCTTAAGCTTTATGCTTTTGTTTTTGAAAATTGGTTCTTTGCCAACAATAGTTTTTGCTTCTTTTAGCTTTT TTTTATTACTTCAGTCATTCACCTTAAGAATAAAAATAACAAATGATGATTTTATCGTTTTACAATTAGGGAAAGAGATT AGAACTTTTCCATTCAAGAACTGGATATCATGGAAATTCTTTTTCCCTATAATCCCAGGTATTTTTTATTTTAGAGAAAA GTCGAGCCCTCATTTATTGCCAATTTTATTTAATCCAAAGCAATTAAAAGATGAGCTCATTAAAAAAGTTGACTCCTTGG AAATTAAAAATTCTTAA
Upstream 100 bases:
>100_bases AAAGGTGGTCCAAAAGAAGTTGGAACAAGTACAACAGGCGCAGTTGTAATGACTCTCGTTACTGTATCTTTAATGGATGT ATTTCTAACACAAATTTTAT
Downstream 100 bases:
>100_bases AATTCAGACTTTGCCTATTCCTCAAAATTAATTAAATGACAAATACAGAAATTTCCGACAATAATCCTGAAAAGGAATTA ATAATAGATAAGTCAATTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MDNPMFKTKSKKEEPVIISPSFQLPIILIVLSFMLLFLKIGSLPTIVFASFSFFLLLQSFTLRIKITNDDFIVLQLGKEI RTFPFKNWISWKFFFPIIPGIFYFREKSSPHLLPILFNPKQLKDELIKKVDSLEIKNS
Sequences:
>Translated_138_residues MDNPMFKTKSKKEEPVIISPSFQLPIILIVLSFMLLFLKIGSLPTIVFASFSFFLLLQSFTLRIKITNDDFIVLQLGKEI RTFPFKNWISWKFFFPIIPGIFYFREKSSPHLLPILFNPKQLKDELIKKVDSLEIKNS >Mature_138_residues MDNPMFKTKSKKEEPVIISPSFQLPIILIVLSFMLLFLKIGSLPTIVFASFSFFLLLQSFTLRIKITNDDFIVLQLGKEI RTFPFKNWISWKFFFPIIPGIFYFREKSSPHLLPILFNPKQLKDELIKKVDSLEIKNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16189; Mature: 16189
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNPMFKTKSKKEEPVIISPSFQLPIILIVLSFMLLFLKIGSLPTIVFASFSFFLLLQSF CCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC TLRIKITNDDFIVLQLGKEIRTFPFKNWISWKFFFPIIPGIFYFREKSSPHLLPILFNPK EEEEEECCCCEEEEEECCHHHCCCCCCCCCCEEHHHHHHHHHEEECCCCCCEEEEEECHH QLKDELIKKVDSLEIKNS HHHHHHHHHHHCCCCCCC >Mature Secondary Structure MDNPMFKTKSKKEEPVIISPSFQLPIILIVLSFMLLFLKIGSLPTIVFASFSFFLLLQSF CCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC TLRIKITNDDFIVLQLGKEIRTFPFKNWISWKFFFPIIPGIFYFREKSSPHLLPILFNPK EEEEEECCCCEEEEEECCHHHCCCCCCCCCCEEHHHHHHHHHEEECCCCCCEEEEEECHH QLKDELIKKVDSLEIKNS HHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA