Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

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The map label for this gene is 123969026

Identifier: 123969026

GI number: 123969026

Start: 1276263

End: 1276580

Strand: Direct

Name: 123969026

Synonym: A9601_14941

Alternate gene names: NA

Gene position: 1276263-1276580 (Clockwise)

Preceding gene: 123969025

Following gene: 123969031

Centisome position: 76.43

GC content: 22.01

Gene sequence:

>318_bases
ATGTTTCCTTGCCTAAAAGAAGGCGACATTGTATTTTTTAAAAAATATAAAAAGAATAAATCAATACTTAAAAATCGACA
AATAGTTATTTTTAATCATCCAATTAAAAATAAAAAACTAATAAAAAGGATAAATTCAGTAAATAAAAATAACGTTGAGG
TTATTGGCGACAATATTGAATTTAGCGAAGATAGTAATAAATTTGGATTAATCAATAACGAAAAAATAATTGGGATTGTT
ACCTCTAAAATGATTATTCCTAAATTAAAAAATTTTTTAATTCAAAAAAACAGAAGCGCTTCTTTGAATCCAAAATAA

Upstream 100 bases:

>100_bases
TTGTAAAAGCTAGTTAATCAGAATTATTTTCAAAAGTTTTTTTGATTTTATTTTATTTTTTTTAGGTTTAAGAAGAACCG
CGATTATTAGTGGTGAATCT

Downstream 100 bases:

>100_bases
TCCCAAAGAAAAGGAAAGACCTCCTGCTACAGTTATTAATCTTTTAATAAATTTTTGACTTGCTTTAAAGGTAGTAAAAG
ATATTAAAAAAGTAAAAAGA

Product: putative signal peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MFPCLKEGDIVFFKKYKKNKSILKNRQIVIFNHPIKNKKLIKRINSVNKNNVEVIGDNIEFSEDSNKFGLINNEKIIGIV
TSKMIIPKLKNFLIQKNRSASLNPK

Sequences:

>Translated_105_residues
MFPCLKEGDIVFFKKYKKNKSILKNRQIVIFNHPIKNKKLIKRINSVNKNNVEVIGDNIEFSEDSNKFGLINNEKIIGIV
TSKMIIPKLKNFLIQKNRSASLNPK
>Mature_105_residues
MFPCLKEGDIVFFKKYKKNKSILKNRQIVIFNHPIKNKKLIKRINSVNKNNVEVIGDNIEFSEDSNKFGLINNEKIIGIV
TSKMIIPKLKNFLIQKNRSASLNPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12173; Mature: 12173

Theoretical pI: Translated: 10.94; Mature: 10.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPCLKEGDIVFFKKYKKNKSILKNRQIVIFNHPIKNKKLIKRINSVNKNNVEVIGDNIE
CCCCCCCCCEEEEEECCCCCHHHCCCCEEEEECCCCCHHHHHHHHCCCCCCEEEEECCEE
FSEDSNKFGLINNEKIIGIVTSKMIIPKLKNFLIQKNRSASLNPK
ECCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MFPCLKEGDIVFFKKYKKNKSILKNRQIVIFNHPIKNKKLIKRINSVNKNNVEVIGDNIE
CCCCCCCCCEEEEEECCCCCHHHCCCCEEEEECCCCCHHHHHHHHCCCCCCEEEEECCEE
FSEDSNKFGLINNEKIIGIVTSKMIIPKLKNFLIQKNRSASLNPK
ECCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA