| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123969026
Identifier: 123969026
GI number: 123969026
Start: 1276263
End: 1276580
Strand: Direct
Name: 123969026
Synonym: A9601_14941
Alternate gene names: NA
Gene position: 1276263-1276580 (Clockwise)
Preceding gene: 123969025
Following gene: 123969031
Centisome position: 76.43
GC content: 22.01
Gene sequence:
>318_bases ATGTTTCCTTGCCTAAAAGAAGGCGACATTGTATTTTTTAAAAAATATAAAAAGAATAAATCAATACTTAAAAATCGACA AATAGTTATTTTTAATCATCCAATTAAAAATAAAAAACTAATAAAAAGGATAAATTCAGTAAATAAAAATAACGTTGAGG TTATTGGCGACAATATTGAATTTAGCGAAGATAGTAATAAATTTGGATTAATCAATAACGAAAAAATAATTGGGATTGTT ACCTCTAAAATGATTATTCCTAAATTAAAAAATTTTTTAATTCAAAAAAACAGAAGCGCTTCTTTGAATCCAAAATAA
Upstream 100 bases:
>100_bases TTGTAAAAGCTAGTTAATCAGAATTATTTTCAAAAGTTTTTTTGATTTTATTTTATTTTTTTTAGGTTTAAGAAGAACCG CGATTATTAGTGGTGAATCT
Downstream 100 bases:
>100_bases TCCCAAAGAAAAGGAAAGACCTCCTGCTACAGTTATTAATCTTTTAATAAATTTTTGACTTGCTTTAAAGGTAGTAAAAG ATATTAAAAAAGTAAAAAGA
Product: putative signal peptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MFPCLKEGDIVFFKKYKKNKSILKNRQIVIFNHPIKNKKLIKRINSVNKNNVEVIGDNIEFSEDSNKFGLINNEKIIGIV TSKMIIPKLKNFLIQKNRSASLNPK
Sequences:
>Translated_105_residues MFPCLKEGDIVFFKKYKKNKSILKNRQIVIFNHPIKNKKLIKRINSVNKNNVEVIGDNIEFSEDSNKFGLINNEKIIGIV TSKMIIPKLKNFLIQKNRSASLNPK >Mature_105_residues MFPCLKEGDIVFFKKYKKNKSILKNRQIVIFNHPIKNKKLIKRINSVNKNNVEVIGDNIEFSEDSNKFGLINNEKIIGIV TSKMIIPKLKNFLIQKNRSASLNPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12173; Mature: 12173
Theoretical pI: Translated: 10.94; Mature: 10.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFPCLKEGDIVFFKKYKKNKSILKNRQIVIFNHPIKNKKLIKRINSVNKNNVEVIGDNIE CCCCCCCCCEEEEEECCCCCHHHCCCCEEEEECCCCCHHHHHHHHCCCCCCEEEEECCEE FSEDSNKFGLINNEKIIGIVTSKMIIPKLKNFLIQKNRSASLNPK ECCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MFPCLKEGDIVFFKKYKKNKSILKNRQIVIFNHPIKNKKLIKRINSVNKNNVEVIGDNIE CCCCCCCCCEEEEEECCCCCHHHCCCCEEEEECCCCCHHHHHHHHCCCCCCEEEEECCEE FSEDSNKFGLINNEKIIGIVTSKMIIPKLKNFLIQKNRSASLNPK ECCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA