| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is surE [H]
Identifier: 123969002
GI number: 123969002
Start: 1254670
End: 1255479
Strand: Direct
Name: surE [H]
Synonym: A9601_14701
Alternate gene names: 123969002
Gene position: 1254670-1255479 (Clockwise)
Preceding gene: 123968999
Following gene: 123969004
Centisome position: 75.14
GC content: 35.56
Gene sequence:
>810_bases ATGAAACCGTTAAATATATTAATTAGCAATGATGATGGTGTTTTTGCTGCAGGGATAAGAGCATTAGCAAAATCAGCTCA AAAAAGAGGACATAAAGTAAAAGTAGTATGTCCTGACCAAGAAAGATCAGCTACTGGTCATGGTCTAACTTTACAATCTC CTTTAAGAGTGGAAAAAGCTGACGAATTGTTTGGGGAAGGAATTGAAGCTTGGGGATGTTCTGGCACGCCTGCTGATTGC GTTAAATTAGCACTATCTGAACTATTGGATAATAAACCTGATCTAATTCTATCTGGAATAAATCACGGTCCAAATTTAGG GACAGATATATTTTGTTCTGGGACAGTAGCTGCAGCCATGGAGGGCACTTTAGAAAATGTTCCTTCAATGGCAATAAGTG TTGCTAGTTTTAAATGGAAGAATTTTGAAGCTGCTGGAGAAATTGCTATGAATATTGCCGAACAAGCAATTAACGATAGT TGGCCTGCTTCACTTCTATTAAACTTGAATATACCACCTTGCGACAAAAGCAAAATAAAAGAATTATCTTGGACAAGATT ATCAGTAAGAAAATATAAAAATCAATTTTCCAAAAGGGAGGATCCAAGGGGTGACGATTATTATTGGTTAGCAGGTGAGG TAGTTTTAGATCTTAAATCAAAAGGTTATGGCCCAAAGAACTGGCCCAGTGACGTATCTCAAATACAAGACAATAAAATA TCTCTAACACCTGTGGAACCAGATTTATTTTGGAGAGGTGATTTAGAAAACTTACCTAAAATTAATAATTCATTTATAAA TCCTTCTTAA
Upstream 100 bases:
>100_bases TCAATTTGACTTAATGATTCAATTTGACTCACTGATATAGTAAAAATAAGTATCACTTTATCTTACTTAAATATTGTCCA TAAATAAAATGCATTGATTA
Downstream 100 bases:
>100_bases AAGCCATAAAGAAAAGCAAAGCCCAAAAAAATGAGCAGCAATAACTTGTGTGTTACTGAGAACTGATAATATTTCAAGTC CAGTAATTGGAATATCAGAT
Product: stationary phase survival protein SurE
Products: NA
Alternate protein names: Nucleoside 5'-monophosphate phosphohydrolase [H]
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MKPLNILISNDDGVFAAGIRALAKSAQKRGHKVKVVCPDQERSATGHGLTLQSPLRVEKADELFGEGIEAWGCSGTPADC VKLALSELLDNKPDLILSGINHGPNLGTDIFCSGTVAAAMEGTLENVPSMAISVASFKWKNFEAAGEIAMNIAEQAINDS WPASLLLNLNIPPCDKSKIKELSWTRLSVRKYKNQFSKREDPRGDDYYWLAGEVVLDLKSKGYGPKNWPSDVSQIQDNKI SLTPVEPDLFWRGDLENLPKINNSFINPS
Sequences:
>Translated_269_residues MKPLNILISNDDGVFAAGIRALAKSAQKRGHKVKVVCPDQERSATGHGLTLQSPLRVEKADELFGEGIEAWGCSGTPADC VKLALSELLDNKPDLILSGINHGPNLGTDIFCSGTVAAAMEGTLENVPSMAISVASFKWKNFEAAGEIAMNIAEQAINDS WPASLLLNLNIPPCDKSKIKELSWTRLSVRKYKNQFSKREDPRGDDYYWLAGEVVLDLKSKGYGPKNWPSDVSQIQDNKI SLTPVEPDLFWRGDLENLPKINNSFINPS >Mature_269_residues MKPLNILISNDDGVFAAGIRALAKSAQKRGHKVKVVCPDQERSATGHGLTLQSPLRVEKADELFGEGIEAWGCSGTPADC VKLALSELLDNKPDLILSGINHGPNLGTDIFCSGTVAAAMEGTLENVPSMAISVASFKWKNFEAAGEIAMNIAEQAINDS WPASLLLNLNIPPCDKSKIKELSWTRLSVRKYKNQFSKREDPRGDDYYWLAGEVVLDLKSKGYGPKNWPSDVSQIQDNKI SLTPVEPDLFWRGDLENLPKINNSFINPS
Specific function: Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates [H]
COG id: COG0496
COG function: function code R; Predicted acid phosphatase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surE nucleotidase family [H]
Homologues:
Organism=Escherichia coli, GI1789101, Length=246, Percent_Identity=36.5853658536585, Blast_Score=146, Evalue=1e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002828 [H]
Pfam domain/function: PF01975 SurE [H]
EC number: =3.1.3.5 [H]
Molecular weight: Translated: 29437; Mature: 29437
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPLNILISNDDGVFAAGIRALAKSAQKRGHKVKVVCPDQERSATGHGLTLQSPLRVEKA CCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEECCCCCHHHH DELFGEGIEAWGCSGTPADCVKLALSELLDNKPDLILSGINHGPNLGTDIFCSGTVAAAM HHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEECCHHHHHH EGTLENVPSMAISVASFKWKNFEAAGEIAMNIAEQAINDSWPASLLLNLNIPPCDKSKIK HHHHHHCCHHHEEHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHH ELSWTRLSVRKYKNQFSKREDPRGDDYYWLAGEVVLDLKSKGYGPKNWPSDVSQIQDNKI HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECEEEEEEHHCCCCCCCCCHHHHHHCCCCE SLTPVEPDLFWRGDLENLPKINNSFINPS EEEECCCCCEECCCHHHCCCCCCCCCCCC >Mature Secondary Structure MKPLNILISNDDGVFAAGIRALAKSAQKRGHKVKVVCPDQERSATGHGLTLQSPLRVEKA CCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEECCCCCHHHH DELFGEGIEAWGCSGTPADCVKLALSELLDNKPDLILSGINHGPNLGTDIFCSGTVAAAM HHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEECCHHHHHH EGTLENVPSMAISVASFKWKNFEAAGEIAMNIAEQAINDSWPASLLLNLNIPPCDKSKIK HHHHHHCCHHHEEHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHH ELSWTRLSVRKYKNQFSKREDPRGDDYYWLAGEVVLDLKSKGYGPKNWPSDVSQIQDNKI HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECEEEEEEHHCCCCCCCCCHHHHHHCCCCE SLTPVEPDLFWRGDLENLPKINNSFINPS EEEECCCCCEECCCHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA