Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

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The map label for this gene is 123968978

Identifier: 123968978

GI number: 123968978

Start: 1230863

End: 1231588

Strand: Direct

Name: 123968978

Synonym: A9601_14461

Alternate gene names: NA

Gene position: 1230863-1231588 (Clockwise)

Preceding gene: 123968977

Following gene: 123968979

Centisome position: 73.71

GC content: 29.61

Gene sequence:

>726_bases
ATGAATTCAAAAAGAAGTGAGCCCTGGTTTAATGAAAGACTAAATTCAATTACTGGTCAGAAAAATTGGTGTAAACAAGA
TGAGATTATTTATAATCAAACTAATCGTCATGCTTCAAAACTTAATTTTTTTTATCAAGCATTTGAGTTTATTTCTGAAA
ATTCAATTTTTGGAAATTATCACGAATTTGGTTGTCATAGATGTAGAACATTTAGGATGGCTCTACTAGAAAGTAGTAGA
CATTTTCTAGAAAATAAAATGAGATTCTTTGCCTATGATAGTTTTAAGGGTTTGCCCAAGGTAGAACAAGATCATGAATT
TGGATCTAGATGGAACGAGGGAGCTTTATCAACTAGTAAAGATGAATTTAAAAAATTGATTTTAGATTCAGGATTTAAAT
TAGATAATGTAAGATTAATTGAAGGCTTTTATGATGTTAGTCTTCCCAACATAGATAAAAAAGAAATCTATTCTGATGAA
AAAGCCTCTTTAATTAATATAGACTGTGATCTCTATGAATCAGCAGTCCCTGTATTTCAACATATTGATTCTTTAGTTCA
AGAGGGGACAATTTTATACATAGATGATTATTTTTCTGGATATAAAGGAAATCCTCAAAAAGGAGTTTCACTTGCATTAA
ATGAATGGAAAAATTCTACGAAATGGAAGCTCGAGAATTATCGCGACGTTGGATATGCTGGAAGAAGTTACGTTTTATAT
AAATAA

Upstream 100 bases:

>100_bases
AGAATGGGAATGGTGGTTTAATCAAAGTGGATATACTGGGGATTATTCATATATATATTTTTCTTAAAAAAAGATTAATG
TTATTATCTTAAAAAAAATT

Downstream 100 bases:

>100_bases
AATAAATATTACTTTATAATTATTTTACTGAATTTAAAAAAATGTCATATATATCAGAGCCAAGTTTTGAAGGTAGTTTT
GATAGATATATATTTAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MNSKRSEPWFNERLNSITGQKNWCKQDEIIYNQTNRHASKLNFFYQAFEFISENSIFGNYHEFGCHRCRTFRMALLESSR
HFLENKMRFFAYDSFKGLPKVEQDHEFGSRWNEGALSTSKDEFKKLILDSGFKLDNVRLIEGFYDVSLPNIDKKEIYSDE
KASLINIDCDLYESAVPVFQHIDSLVQEGTILYIDDYFSGYKGNPQKGVSLALNEWKNSTKWKLENYRDVGYAGRSYVLY
K

Sequences:

>Translated_241_residues
MNSKRSEPWFNERLNSITGQKNWCKQDEIIYNQTNRHASKLNFFYQAFEFISENSIFGNYHEFGCHRCRTFRMALLESSR
HFLENKMRFFAYDSFKGLPKVEQDHEFGSRWNEGALSTSKDEFKKLILDSGFKLDNVRLIEGFYDVSLPNIDKKEIYSDE
KASLINIDCDLYESAVPVFQHIDSLVQEGTILYIDDYFSGYKGNPQKGVSLALNEWKNSTKWKLENYRDVGYAGRSYVLY
K
>Mature_241_residues
MNSKRSEPWFNERLNSITGQKNWCKQDEIIYNQTNRHASKLNFFYQAFEFISENSIFGNYHEFGCHRCRTFRMALLESSR
HFLENKMRFFAYDSFKGLPKVEQDHEFGSRWNEGALSTSKDEFKKLILDSGFKLDNVRLIEGFYDVSLPNIDKKEIYSDE
KASLINIDCDLYESAVPVFQHIDSLVQEGTILYIDDYFSGYKGNPQKGVSLALNEWKNSTKWKLENYRDVGYAGRSYVLY
K

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28394; Mature: 28394

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSKRSEPWFNERLNSITGQKNWCKQDEIIYNQTNRHASKLNFFYQAFEFISENSIFGNY
CCCCCCCCHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCH
HEFGCHRCRTFRMALLESSRHFLENKMRFFAYDSFKGLPKVEQDHEFGSRWNEGALSTSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHCCCCCCCCCCCH
DEFKKLILDSGFKLDNVRLIEGFYDVSLPNIDKKEIYSDEKASLINIDCDLYESAVPVFQ
HHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCHHHHCCCCCCEEEEECHHHHHHHHHHHH
HIDSLVQEGTILYIDDYFSGYKGNPQKGVSLALNEWKNSTKWKLENYRDVGYAGRSYVLY
HHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEE
K
C
>Mature Secondary Structure
MNSKRSEPWFNERLNSITGQKNWCKQDEIIYNQTNRHASKLNFFYQAFEFISENSIFGNY
CCCCCCCCHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCH
HEFGCHRCRTFRMALLESSRHFLENKMRFFAYDSFKGLPKVEQDHEFGSRWNEGALSTSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHCCCCCCCCCCCH
DEFKKLILDSGFKLDNVRLIEGFYDVSLPNIDKKEIYSDEKASLINIDCDLYESAVPVFQ
HHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCHHHHCCCCCCEEEEECHHHHHHHHHHHH
HIDSLVQEGTILYIDDYFSGYKGNPQKGVSLALNEWKNSTKWKLENYRDVGYAGRSYVLY
HHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEE
K
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA