| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
Click here to switch to the map view.
The map label for this gene is cyaD [H]
Identifier: 123968964
GI number: 123968964
Start: 1206070
End: 1207233
Strand: Direct
Name: cyaD [H]
Synonym: A9601_14321
Alternate gene names: 123968964
Gene position: 1206070-1207233 (Clockwise)
Preceding gene: 123968963
Following gene: 123968965
Centisome position: 72.22
GC content: 27.66
Gene sequence:
>1164_bases TTGAATAAATTATTTAAAAATTTAAAAGATAAAGTTGATTCTTTTTATTCAACTGAAGGAACAGATTTGGATAAAGATAT ATTCATTAATAGTGATCAAAGATTACTTAAAGTTGCTAGCTCAATAATTGTTTTAACAAGTTTTCTTGGAATAGGATGGC TAGCACTAGCAAAAACAGATGAAATAATAATCGTACCTGGAAAAATTATTCCAATTGGAAAAGTAAAAGAAATTAAAATG CCTATGTCAGGTGTTATAGAAAAAATAGAAATTAAAGAAGGTGATCTTGTATATGAAAAACAAGTTTTAATGAGAATTGA AAGTGATACAAATTCTAATTTATCTACTACTTTAGAAAATTCAATAAAAATAAAAAAACAGCAAATTGAGTCATTAAATT CTCAAATATTAAACACACAAGAAATATACAATAAAAATAAAAATATTCTTAAAGATAAGATTGATATTTATCAGAATATT ACTGATAAATATCAAACTCTACTAGATGAAGGTGCAATCTCTGAGTTGAACTTTCTTGAACAAAAGACAAAATTACAATC TCTAAAGTCAGACTTACTTCAATATGAAATGGATTGGGCTACTAAAAGTAAATCTCAAGAACTACAAATGCAAGAGTTAA AAAATTCATTAAATCAATTGAAAGGAGAATTAGAAGAAAATGATCTTAATTTAGGGAAGAAAAGTATTAATTCGCCAGTT AATGGTTACATTTTCGATTTAAAGCCAGTCGCATCAGGATATTCAGCCCAGATGACTGAAACTATTGTAAAAATTGTTCC CATGGGAGATCTAATTGCATATTTAGAAATCCCAAGTTCTGATATCGGATTTGTAAAAGAAGGAATGGATGTGGAAATTA GTATTGATTCATATCCCTCAACAGATTTTGGAATAATAGAAGGCACTATAACTAGTATTGGCACCGATGCACTTGAACCT GATCCAAGTGAACAAAGGAATCAATTTGTTTATCCAGCGCGGATTGAGCTTAAGAGTCAAAAACTAAAATTAAGGAGAGG AAAACAATTAGATTTAAAAGTTGGAATGTCTTTACAAGGAAATATAAAACTTAGAAAAGTATCTTATCTGCAATTGCTAT TTACTAACTTTAAAGATAAGACAAAATCTATACAAGAACTTTAA
Upstream 100 bases:
>100_bases TGTTTTTGAAAAAGGTGACTTATCTGAACAAGGAGATCATGAATCACTTCTTAAAAACAAATCAGTATATTATTCACTCT TAAATAATGAGGAAAAATAA
Downstream 100 bases:
>100_bases GCTTATTTAAATTAAAGTTTTTTTGTAAGAATGTTTTTAAAAAATAAATAAAAAATAAATAAAAAATAAATTATAAATGG TTATTTAAATAATTTTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues MNKLFKNLKDKVDSFYSTEGTDLDKDIFINSDQRLLKVASSIIVLTSFLGIGWLALAKTDEIIIVPGKIIPIGKVKEIKM PMSGVIEKIEIKEGDLVYEKQVLMRIESDTNSNLSTTLENSIKIKKQQIESLNSQILNTQEIYNKNKNILKDKIDIYQNI TDKYQTLLDEGAISELNFLEQKTKLQSLKSDLLQYEMDWATKSKSQELQMQELKNSLNQLKGELEENDLNLGKKSINSPV NGYIFDLKPVASGYSAQMTETIVKIVPMGDLIAYLEIPSSDIGFVKEGMDVEISIDSYPSTDFGIIEGTITSIGTDALEP DPSEQRNQFVYPARIELKSQKLKLRRGKQLDLKVGMSLQGNIKLRKVSYLQLLFTNFKDKTKSIQEL
Sequences:
>Translated_387_residues MNKLFKNLKDKVDSFYSTEGTDLDKDIFINSDQRLLKVASSIIVLTSFLGIGWLALAKTDEIIIVPGKIIPIGKVKEIKM PMSGVIEKIEIKEGDLVYEKQVLMRIESDTNSNLSTTLENSIKIKKQQIESLNSQILNTQEIYNKNKNILKDKIDIYQNI TDKYQTLLDEGAISELNFLEQKTKLQSLKSDLLQYEMDWATKSKSQELQMQELKNSLNQLKGELEENDLNLGKKSINSPV NGYIFDLKPVASGYSAQMTETIVKIVPMGDLIAYLEIPSSDIGFVKEGMDVEISIDSYPSTDFGIIEGTITSIGTDALEP DPSEQRNQFVYPARIELKSQKLKLRRGKQLDLKVGMSLQGNIKLRKVSYLQLLFTNFKDKTKSIQEL >Mature_387_residues MNKLFKNLKDKVDSFYSTEGTDLDKDIFINSDQRLLKVASSIIVLTSFLGIGWLALAKTDEIIIVPGKIIPIGKVKEIKM PMSGVIEKIEIKEGDLVYEKQVLMRIESDTNSNLSTTLENSIKIKKQQIESLNSQILNTQEIYNKNKNILKDKIDIYQNI TDKYQTLLDEGAISELNFLEQKTKLQSLKSDLLQYEMDWATKSKSQELQMQELKNSLNQLKGELEENDLNLGKKSINSPV NGYIFDLKPVASGYSAQMTETIVKIVPMGDLIAYLEIPSSDIGFVKEGMDVEISIDSYPSTDFGIIEGTITSIGTDALEP DPSEQRNQFVYPARIELKSQKLKLRRGKQLDLKVGMSLQGNIKLRKVSYLQLLFTNFKDKTKSIQEL
Specific function: CyaD is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) [H]
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003997 - InterPro: IPR006143 - InterPro: IPR006144 - InterPro: IPR010129 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 43810; Mature: 43810
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLFKNLKDKVDSFYSTEGTDLDKDIFINSDQRLLKVASSIIVLTSFLGIGWLALAKTD CCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHEEECCC EIIIVPGKIIPIGKVKEIKMPMSGVIEKIEIKEGDLVYEKQVLMRIESDTNSNLSTTLEN CEEEECCCEECCCCCHHCCCCHHHHHHEEEECCCCCHHHHHHHHEEECCCCCCCHHHHHH SIKIKKQQIESLNSQILNTQEIYNKNKNILKDKIDIYQNITDKYQTLLDEGAISELNFLE HHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH QKTKLQSLKSDLLQYEMDWATKSKSQELQMQELKNSLNQLKGELEENDLNLGKKSINSPV HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCC NGYIFDLKPVASGYSAQMTETIVKIVPMGDLIAYLEIPSSDIGFVKEGMDVEISIDSYPS CCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHCCCEEEEEECCCCC TDFGIIEGTITSIGTDALEPDPSEQRNQFVYPARIELKSQKLKLRRGKQLDLKVGMSLQG CCCCEEECHHHHCCCCCCCCCCCHHHCCEECCEEEEECHHHHHHHCCCEEEEEECCEEEC NIKLRKVSYLQLLFTNFKDKTKSIQEL CEEEEHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNKLFKNLKDKVDSFYSTEGTDLDKDIFINSDQRLLKVASSIIVLTSFLGIGWLALAKTD CCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHEEECCC EIIIVPGKIIPIGKVKEIKMPMSGVIEKIEIKEGDLVYEKQVLMRIESDTNSNLSTTLEN CEEEECCCEECCCCCHHCCCCHHHHHHEEEECCCCCHHHHHHHHEEECCCCCCCHHHHHH SIKIKKQQIESLNSQILNTQEIYNKNKNILKDKIDIYQNITDKYQTLLDEGAISELNFLE HHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH QKTKLQSLKSDLLQYEMDWATKSKSQELQMQELKNSLNQLKGELEENDLNLGKKSINSPV HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCC NGYIFDLKPVASGYSAQMTETIVKIVPMGDLIAYLEIPSSDIGFVKEGMDVEISIDSYPS CCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHCCCEEEEEECCCCC TDFGIIEGTITSIGTDALEPDPSEQRNQFVYPARIELKSQKLKLRRGKQLDLKVGMSLQG CCCCEEECHHHHCCCCCCCCCCCHHHCCEECCEEEEECHHHHHHHCCCEEEEEECCEEEC NIKLRKVSYLQLLFTNFKDKTKSIQEL CEEEEHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2905265; 12910271 [H]