| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968948
Identifier: 123968948
GI number: 123968948
Start: 1187864
End: 1188976
Strand: Reverse
Name: 123968948
Synonym: A9601_14151
Alternate gene names: NA
Gene position: 1188976-1187864 (Counterclockwise)
Preceding gene: 123968949
Following gene: 123968947
Centisome position: 71.2
GC content: 25.25
Gene sequence:
>1113_bases ATGGCAAAGGAATGTGTAAATTGTTTATTAAATGATTCTTTAAGCAATGTATTTATTGATAATTCTAATATTTGTAATTT TTGTAAGTCTTATTCAAAAAGAAAAAAACAAAATAATGATAAGCAGTTAAAAAAAATAGCTTTGACTAATATTCTTAATA AAATAAAAGATAATAATAATAAAAAATATGATTGTATTGTTGGAGTATCTGGAGGATTAGATAGTTCAACAGTTTTAATA AAAGCTAAAGAGCTAGGGCTAAGGTGTTTAGCAGTTCATATGGATAATGGATGGGATGAACCTTTATCTCAGAGAAATAT TGAGATAATTCTTAAAGCTACGGGATTTGATTATGAAACTTGGGTTATTGATTGGGAGGAATATAGAGACTTACAAAAAG CTTATATCGCTTCAGATCTAATAGATATAGAAATGCTTTATGACAATGCAGCCTTTGCTGTAAATTTTTATTTCGCTCAA AAATATAAAGTTAAAACAATTCTATCCGGGGAAAATATTGCTACAGAGGGTATTTCAATGCCAAAAGAATGGTCTTGGCA AAAATATGATGCAACAAATATTTTGTCAATTGCAAAATCAGCAAATATAACATTAAAGACTTTTCCTTATATTCGTTTTA GAAGAGTATTATTAGCTAAAATTTTAGGAATTAACAGAATACCACTACTAAATTATATTGAATATAGTAAGGAAATTGCT TTAGAAAAATTGATACCATTAGGTTATCAACCATATCCGTATAAACATTATGAATCAGTTTTTACAAGATTTTATCAAGG AGAGATATTACCTAGAAAGTTTAATATCGACAAAAGATTAATTCATCTATCATCTTTGATTCAGAATGAGTCAATTACAA AAAAAGAAGCAAAAAAAGAATTAAATAAACATCCTTATTTAGATTTGCTTAAGTTAAAAAAAGATAGAAAATTTATCTGT AAAAAACTTAAATTAAGCGAATCTGATTTTGAAAGTTATTTAAAAAGGCCCGAAAGAAGTCATCTAAATTTTAAATCTCA TGCAAGGCTTGTTATTATTTTTGCAAAAGTAATAAAATTTATTTTTAGAATTAAAAAAAAGATTTATTTTTAA
Upstream 100 bases:
>100_bases GAGCTGATGGAGTTATGGCAAGTAAGTTTTTTTCTCTTTATGGGAATTGTGATGGAGTATTATTGACTTATCCAACCTAT CAGGATATTGAAAAACTTTA
Downstream 100 bases:
>100_bases TAATTTATATAAATTACAAATAATTTAAATTTATAGAATGACTTATTTTTATTTATTTTTAATTTTTATTATATTTGCCT TATCAAGCTATTTTATTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: N-Acetyl Sugar Amidotransferase; PP-Loop Superfamily Protein; Lipopolysaccharide Synthesis Protein; ExsB Family Protein; Cell Cycle Control ATPase; PP-Loop Domain-Containing Protein; PP-Loop Domain Protein; Putitive LPS Biosynthesis Protein
Number of amino acids: Translated: 370; Mature: 369
Protein sequence:
>370_residues MAKECVNCLLNDSLSNVFIDNSNICNFCKSYSKRKKQNNDKQLKKIALTNILNKIKDNNNKKYDCIVGVSGGLDSSTVLI KAKELGLRCLAVHMDNGWDEPLSQRNIEIILKATGFDYETWVIDWEEYRDLQKAYIASDLIDIEMLYDNAAFAVNFYFAQ KYKVKTILSGENIATEGISMPKEWSWQKYDATNILSIAKSANITLKTFPYIRFRRVLLAKILGINRIPLLNYIEYSKEIA LEKLIPLGYQPYPYKHYESVFTRFYQGEILPRKFNIDKRLIHLSSLIQNESITKKEAKKELNKHPYLDLLKLKKDRKFIC KKLKLSESDFESYLKRPERSHLNFKSHARLVIIFAKVIKFIFRIKKKIYF
Sequences:
>Translated_370_residues MAKECVNCLLNDSLSNVFIDNSNICNFCKSYSKRKKQNNDKQLKKIALTNILNKIKDNNNKKYDCIVGVSGGLDSSTVLI KAKELGLRCLAVHMDNGWDEPLSQRNIEIILKATGFDYETWVIDWEEYRDLQKAYIASDLIDIEMLYDNAAFAVNFYFAQ KYKVKTILSGENIATEGISMPKEWSWQKYDATNILSIAKSANITLKTFPYIRFRRVLLAKILGINRIPLLNYIEYSKEIA LEKLIPLGYQPYPYKHYESVFTRFYQGEILPRKFNIDKRLIHLSSLIQNESITKKEAKKELNKHPYLDLLKLKKDRKFIC KKLKLSESDFESYLKRPERSHLNFKSHARLVIIFAKVIKFIFRIKKKIYF >Mature_369_residues AKECVNCLLNDSLSNVFIDNSNICNFCKSYSKRKKQNNDKQLKKIALTNILNKIKDNNNKKYDCIVGVSGGLDSSTVLIK AKELGLRCLAVHMDNGWDEPLSQRNIEIILKATGFDYETWVIDWEEYRDLQKAYIASDLIDIEMLYDNAAFAVNFYFAQK YKVKTILSGENIATEGISMPKEWSWQKYDATNILSIAKSANITLKTFPYIRFRRVLLAKILGINRIPLLNYIEYSKEIAL EKLIPLGYQPYPYKHYESVFTRFYQGEILPRKFNIDKRLIHLSSLIQNESITKKEAKKELNKHPYLDLLKLKKDRKFICK KLKLSESDFESYLKRPERSHLNFKSHARLVIIFAKVIKFIFRIKKKIYF
Specific function: Unknown
COG id: COG0037
COG function: function code D; Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43381; Mature: 43250
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKECVNCLLNDSLSNVFIDNSNICNFCKSYSKRKKQNNDKQLKKIALTNILNKIKDNNN CCHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC KKYDCIVGVSGGLDSSTVLIKAKELGLRCLAVHMDNGWDEPLSQRNIEIILKATGFDYET CEEEEEEEECCCCCCCEEEEEEHHCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCCEEE WVIDWEEYRDLQKAYIASDLIDIEMLYDNAAFAVNFYFAQKYKVKTILSGENIATEGISM EEECHHHHHHHHHHHHHHHHHEEEEEECCCEEEEEEEEECEEEEEEEECCCCCCCCCCCC PKEWSWQKYDATNILSIAKSANITLKTFPYIRFRRVLLAKILGINRIPLLNYIEYSKEIA CCCCCCCCCCCHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH LEKLIPLGYQPYPYKHYESVFTRFYQGEILPRKFNIDKRLIHLSSLIQNESITKKEAKKE HHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHCCCCHHHHHHHH LNKHPYLDLLKLKKDRKFICKKLKLSESDFESYLKRPERSHLNFKSHARLVIIFAKVIKF HCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHH IFRIKKKIYF HHHHHHHHCC >Mature Secondary Structure AKECVNCLLNDSLSNVFIDNSNICNFCKSYSKRKKQNNDKQLKKIALTNILNKIKDNNN CHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC KKYDCIVGVSGGLDSSTVLIKAKELGLRCLAVHMDNGWDEPLSQRNIEIILKATGFDYET CEEEEEEEECCCCCCCEEEEEEHHCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCCEEE WVIDWEEYRDLQKAYIASDLIDIEMLYDNAAFAVNFYFAQKYKVKTILSGENIATEGISM EEECHHHHHHHHHHHHHHHHHEEEEEECCCEEEEEEEEECEEEEEEEECCCCCCCCCCCC PKEWSWQKYDATNILSIAKSANITLKTFPYIRFRRVLLAKILGINRIPLLNYIEYSKEIA CCCCCCCCCCCHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH LEKLIPLGYQPYPYKHYESVFTRFYQGEILPRKFNIDKRLIHLSSLIQNESITKKEAKKE HHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHCCCCHHHHHHHH LNKHPYLDLLKLKKDRKFICKKLKLSESDFESYLKRPERSHLNFKSHARLVIIFAKVIKF HCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHH IFRIKKKIYF HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA