| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968908
Identifier: 123968908
GI number: 123968908
Start: 1143692
End: 1144270
Strand: Direct
Name: 123968908
Synonym: A9601_13751
Alternate gene names: NA
Gene position: 1143692-1144270 (Clockwise)
Preceding gene: 123968907
Following gene: 123968909
Centisome position: 68.49
GC content: 28.32
Gene sequence:
>579_bases ATGTTAAAAATCACAAAAAACCATAATTTAAATCTTAAAATTTTAAGATTTTTTATTATCCCTATAATTTTAGTTTTAAC TCCTTTTTTTAATAATTTACAAGAGGCTAAATCGGGGTTGGAATTCCAGTGGGATCAAGACGATAGTTTTAGAAGATTGA AGTGGTTTCAAAAACAAAAAAAAAGGCAATTTAAGAATACAATTTATTTTTTCTTGAGGCCATCTGATAGAAAAACTGAT CTCTTAAAAATTAATCTAGCAATTCCTAAGACCTTTAAATCCACGTTAAAAAACGAAAAAATTAGTTTTTGTAAAGTAAA AATAGGCGGTTTTGATAGTAATACAAAATGTTTAGAAGACATTCCATCTGATATCGAAATTAATACTGATGAATCAGGCT TACGTTCACTAGATATTTACCCCTACAGTCCAATTTCTTCTGACAAAGACAGTTATGCAATTGTATTAAAAATCTTTAAT CCCAAAAGATCAGGTTTATTTCAATTTCATTCATTTGGGCAACCTAAAGGGAAATCATATTCAAGTTATTTAGGAAGCTG GACCGTAGTGATCGATTAA
Upstream 100 bases:
>100_bases GCTGCAAAATTAAGGACAGATAGATGTTAATCTTAGTGAAATTATTTTTCTGCTTTAAATTTGAATAGCACGAACTCAAC CTTTAAATTCCATTCCAGTA
Downstream 100 bases:
>100_bases ATGATAAATTAAATAAGGATAATTAAAAAAATGACTAAAAGAACTTTTGGCGGAACTTCAAGAAAAAGAAAACGTGTATC TGGTTTTAGAGTAAGAATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MLKITKNHNLNLKILRFFIIPIILVLTPFFNNLQEAKSGLEFQWDQDDSFRRLKWFQKQKKRQFKNTIYFFLRPSDRKTD LLKINLAIPKTFKSTLKNEKISFCKVKIGGFDSNTKCLEDIPSDIEINTDESGLRSLDIYPYSPISSDKDSYAIVLKIFN PKRSGLFQFHSFGQPKGKSYSSYLGSWTVVID
Sequences:
>Translated_192_residues MLKITKNHNLNLKILRFFIIPIILVLTPFFNNLQEAKSGLEFQWDQDDSFRRLKWFQKQKKRQFKNTIYFFLRPSDRKTD LLKINLAIPKTFKSTLKNEKISFCKVKIGGFDSNTKCLEDIPSDIEINTDESGLRSLDIYPYSPISSDKDSYAIVLKIFN PKRSGLFQFHSFGQPKGKSYSSYLGSWTVVID >Mature_192_residues MLKITKNHNLNLKILRFFIIPIILVLTPFFNNLQEAKSGLEFQWDQDDSFRRLKWFQKQKKRQFKNTIYFFLRPSDRKTD LLKINLAIPKTFKSTLKNEKISFCKVKIGGFDSNTKCLEDIPSDIEINTDESGLRSLDIYPYSPISSDKDSYAIVLKIFN PKRSGLFQFHSFGQPKGKSYSSYLGSWTVVID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22435; Mature: 22435
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKITKNHNLNLKILRFFIIPIILVLTPFFNNLQEAKSGLEFQWDQDDSFRRLKWFQKQK CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHH KRQFKNTIYFFLRPSDRKTDLLKINLAIPKTFKSTLKNEKISFCKVKIGGFDSNTKCLED HHHHCCEEEEEECCCCCCCEEEEEEEECCHHHHHHHCCCCEEEEEEEECCCCCCCHHHHH IPSDIEINTDESGLRSLDIYPYSPISSDKDSYAIVLKIFNPKRSGLFQFHSFGQPKGKSY CCCCEEECCCCCCCEEEECCCCCCCCCCCCCEEEEEEEECCCCCCEEEHHCCCCCCCCCH SSYLGSWTVVID HHHCCEEEEEEC >Mature Secondary Structure MLKITKNHNLNLKILRFFIIPIILVLTPFFNNLQEAKSGLEFQWDQDDSFRRLKWFQKQK CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHH KRQFKNTIYFFLRPSDRKTDLLKINLAIPKTFKSTLKNEKISFCKVKIGGFDSNTKCLED HHHHCCEEEEEECCCCCCCEEEEEEEECCHHHHHHHCCCCEEEEEEEECCCCCCCHHHHH IPSDIEINTDESGLRSLDIYPYSPISSDKDSYAIVLKIFNPKRSGLFQFHSFGQPKGKSY CCCCEEECCCCCCCEEEECCCCCCCCCCCCCEEEEEEEECCCCCCEEEHHCCCCCCCCCH SSYLGSWTVVID HHHCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA