| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968809
Identifier: 123968809
GI number: 123968809
Start: 1073017
End: 1073535
Strand: Direct
Name: 123968809
Synonym: A9601_12761
Alternate gene names: NA
Gene position: 1073017-1073535 (Clockwise)
Preceding gene: 123968808
Following gene: 123968810
Centisome position: 64.26
GC content: 30.64
Gene sequence:
>519_bases ATGGCACTTAATAAAATATTTATTAAAAGAGGATTTTTAAATTATCTAATTTTTTCTGGAATTCTTTTTACAAATATAAT TAATCCATATAAGAGTATTGCTTTAACTCAAGAAAATATAGATATCCCAAAAGTTGTTTCTTACAGATCAGCATCATGTG GTTGTTGCAAAAAATGGATCAATCATTTAAGAGCTAATGGATTAGAAGTTGTTGATAATATAGTTGAGGATGTTTCAGTA ATTAAAAACCAATATCAAATTCCCAATAATCTGAGATCATGTCACTCTGCTCAAATAGCTAACTATATGATTGAAGGACA TGTCCCGATTGAATCAATCAACAAACTTTTTAGAGAAAAACCAAATATCAATGGGATAGCAGTTCCGGGCATGCCACTTG GCTCTCCAGGGATGGAAATGCATTCTCACGATTCGCACTCTCATGATTATGAGAACTACAAAGTAGTTTCATTTAGTAAA ACTGGCAAAACAAAAATATTTGATAAAATCTCTCCTTAA
Upstream 100 bases:
>100_bases TTAATGGCAATTATGAGTGTCTTAATTTTTATTAAATAGCGATTTAATAAATTTTCATTTATGGTTAATTTAAATATTAA ATTTAATCGTCGTAATTAGT
Downstream 100 bases:
>100_bases TAAAAATACTTTTTTGAAATAATGTATATTTTTCTTAGAAATTTTAAATTTTTTATTTTTTTATTTACCTTATTTCTAAA TTTCAACAGTTATTTGCATG
Product: metal-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MALNKIFIKRGFLNYLIFSGILFTNIINPYKSIALTQENIDIPKVVSYRSASCGCCKKWINHLRANGLEVVDNIVEDVSV IKNQYQIPNNLRSCHSAQIANYMIEGHVPIESINKLFREKPNINGIAVPGMPLGSPGMEMHSHDSHSHDYENYKVVSFSK TGKTKIFDKISP
Sequences:
>Translated_172_residues MALNKIFIKRGFLNYLIFSGILFTNIINPYKSIALTQENIDIPKVVSYRSASCGCCKKWINHLRANGLEVVDNIVEDVSV IKNQYQIPNNLRSCHSAQIANYMIEGHVPIESINKLFREKPNINGIAVPGMPLGSPGMEMHSHDSHSHDYENYKVVSFSK TGKTKIFDKISP >Mature_171_residues ALNKIFIKRGFLNYLIFSGILFTNIINPYKSIALTQENIDIPKVVSYRSASCGCCKKWINHLRANGLEVVDNIVEDVSVI KNQYQIPNNLRSCHSAQIANYMIEGHVPIESINKLFREKPNINGIAVPGMPLGSPGMEMHSHDSHSHDYENYKVVSFSKT GKTKIFDKISP
Specific function: Unknown
COG id: COG3019
COG function: function code R; Predicted metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19381; Mature: 19249
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALNKIFIKRGFLNYLIFSGILFTNIINPYKSIALTQENIDIPKVVSYRSASCGCCKKWI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHCCCCCHHHHHHH NHLRANGLEVVDNIVEDVSVIKNQYQIPNNLRSCHSAQIANYMIEGHVPIESINKLFREK HHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC PNINGIAVPGMPLGSPGMEMHSHDSHSHDYENYKVVSFSKTGKTKIFDKISP CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure ALNKIFIKRGFLNYLIFSGILFTNIINPYKSIALTQENIDIPKVVSYRSASCGCCKKWI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHCCCCCHHHHHHH NHLRANGLEVVDNIVEDVSVIKNQYQIPNNLRSCHSAQIANYMIEGHVPIESINKLFREK HHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC PNINGIAVPGMPLGSPGMEMHSHDSHSHDYENYKVVSFSKTGKTKIFDKISP CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA