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The map label for this gene is psbA

Identifier: 123968785

GI number: 123968785

Start: 1058789

End: 1059871

Strand: Direct

Name: psbA

Synonym: A9601_12521

Alternate gene names: 123968785

Gene position: 1058789-1059871 (Clockwise)

Preceding gene: 123968782

Following gene: 123968789

Centisome position: 63.4

GC content: 43.77

Gene sequence:

>1083_bases
ATGACAACTATTCAGCAGCAGCGTTCTTCGCTGTTAAAAGGTTGGCCACAGTTTTGTGAGTGGGTAACATCAACTAACAA
CAGAATTTATGTTGGTTGGTTCGGCGTCTTAATGATTCCATGCCTTCTTACAGCAGCGGCTTGCTTCATCGTTGCATTCA
TCGCAGCACCACCAGTAGACATCGACGGAATTAGAGAGCCAGTTGCTGGTTCATTCCTATATGGAAACAACATCATCTCA
GGTGCAGTTGTTCCTTCATCTAACGCTATTGGTCTACACTTCTACCCAATTTGGGAAGCAGCTACTGTAGATGAGTGGTT
ATACAACGGTGGTCCTTACCAGCTTGTAATTTTCCACTTCCTAATTGGTATCTCAGCATACATGGGAAGACAGTGGGAGC
TTTCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTTTCAGCAGCTTTCGCAGTATTTCTT
GTATACCCATTCGGTCAAGGTTCATTCTCTGACGGAATGCCTTTAGGTATCTCTGGAACATTCAACTTCATGTTTGTTTT
CCAGGCAGAGCACAACATTCTTATGCACCCATTCCACATGGCTGGTGTTGCTGGTATGTTCGGAGGATCTTTATTCTCAG
CTATGCACGGTTCACTTGTTACTTCATCTCTAATCAGAGAAACAACTGAGACAGAGTCTCAGAACTATGGTTACAAGTTC
GGACAAGAAGAAGAAACATATAACATCGTTGCAGCTCATGGCTACTTCGGTCGTTTGATCTTCCAATATGCTTCATTCAA
CAACAGCAGAAGTCTTCACTTCTTCCTAGCTGTATTCCCAGTTGTTTGTGTATGGTTAACTTCAATGGGTATCTGCACAA
TGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCAGTTGTTGATGCAAACGGTAAGATTGTTCCTACATGGGGTGAC
GTTCTTAACAGAGCAAACCTAGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCACTTGATCTAGCAGCAGC
TGAGTCTACAACAGTAGCTCTTTCAGCTCCAGCTATCGGTTAA

Upstream 100 bases:

>100_bases
CCGCTCATTTATTGAATTTTTGGACTATGCTTACTGGGACGGAATATTTAATCCGTTCTTACTTAAACGTCTCGTATAGA
GGCAATAACATAACGAACTC

Downstream 100 bases:

>100_bases
GCTTAAAGTTCTTAAATTTACAAGCCCCCTTTTTGGGGGCTTTTTTTTTGTTTAATTTTCAATTGGGTATGCATATTTAT
TACTGAGAACCAAATCGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: 32 kDa thylakoid membrane protein; Photosystem II protein D1

Number of amino acids: Translated: 360; Mature: 359

Protein sequence:

>360_residues
MTTIQQQRSSLLKGWPQFCEWVTSTNNRIYVGWFGVLMIPCLLTAAACFIVAFIAAPPVDIDGIREPVAGSFLYGNNIIS
GAVVPSSNAIGLHFYPIWEAATVDEWLYNGGPYQLVIFHFLIGISAYMGRQWELSYRLGMRPWICVAYSAPVSAAFAVFL
VYPFGQGSFSDGMPLGISGTFNFMFVFQAEHNILMHPFHMAGVAGMFGGSLFSAMHGSLVTSSLIRETTETESQNYGYKF
GQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAVFPVVCVWLTSMGICTMAFNLNGFNFNQSVVDANGKIVPTWGD
VLNRANLGMEVMHERNAHNFPLDLAAAESTTVALSAPAIG

Sequences:

>Translated_360_residues
MTTIQQQRSSLLKGWPQFCEWVTSTNNRIYVGWFGVLMIPCLLTAAACFIVAFIAAPPVDIDGIREPVAGSFLYGNNIIS
GAVVPSSNAIGLHFYPIWEAATVDEWLYNGGPYQLVIFHFLIGISAYMGRQWELSYRLGMRPWICVAYSAPVSAAFAVFL
VYPFGQGSFSDGMPLGISGTFNFMFVFQAEHNILMHPFHMAGVAGMFGGSLFSAMHGSLVTSSLIRETTETESQNYGYKF
GQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAVFPVVCVWLTSMGICTMAFNLNGFNFNQSVVDANGKIVPTWGD
VLNRANLGMEVMHERNAHNFPLDLAAAESTTVALSAPAIG
>Mature_359_residues
TTIQQQRSSLLKGWPQFCEWVTSTNNRIYVGWFGVLMIPCLLTAAACFIVAFIAAPPVDIDGIREPVAGSFLYGNNIISG
AVVPSSNAIGLHFYPIWEAATVDEWLYNGGPYQLVIFHFLIGISAYMGRQWELSYRLGMRPWICVAYSAPVSAAFAVFLV
YPFGQGSFSDGMPLGISGTFNFMFVFQAEHNILMHPFHMAGVAGMFGGSLFSAMHGSLVTSSLIRETTETESQNYGYKFG
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAVFPVVCVWLTSMGICTMAFNLNGFNFNQSVVDANGKIVPTWGDV
LNRANLGMEVMHERNAHNFPLDLAAAESTTVALSAPAIG

Specific function: This is one of the two reaction center proteins of photosystem II

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the reaction center pufL/M/psbA/D family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSBA_PROM0 (A3PAU3)

Other databases:

- EMBL:   CP000576
- RefSeq:   YP_001090469.1
- ProteinModelPortal:   A3PAU3
- SMR:   A3PAU3
- STRING:   A3PAU3
- GeneID:   4911580
- GenomeReviews:   CP000576_GR
- KEGG:   pmg:P9301_02451
- eggNOG:   NOG04871
- HOGENOM:   HBG284766
- OMA:   GIWFTSM
- ProtClustDB:   CLSK892431
- BioCyc:   PMAR167546:P9301ORF_0247-MONOMER
- GO:   GO:0006810
- HAMAP:   MF_01379
- InterPro:   IPR000484
- InterPro:   IPR005867
- Gene3D:   G3DSA:1.20.85.10
- PRINTS:   PR00256
- TIGRFAMs:   TIGR01151

Pfam domain/function: PF00124 Photo_RC; SSF81483 Photo_RC_L/M

EC number: NA

Molecular weight: Translated: 39638; Mature: 39507

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: PS00244 REACTION_CENTER

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1f0f7cc0)-; HASH(0x1f80f594)-; HASH(0x1f6688ec)-; HASH(0x1fff4978)-; HASH(0x1e3f00f4)-;

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTIQQQRSSLLKGWPQFCEWVTSTNNRIYVGWFGVLMIPCLLTAAACFIVAFIAAPPVD
CCCHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCC
IDGIREPVAGSFLYGNNIISGAVVPSSNAIGLHFYPIWEAATVDEWLYNGGPYQLVIFHF
CCCCCCCCCCCEEECCCEEECEEECCCCCEEEEEEECCCCCHHHHHHHCCCCHHHHHHHH
LIGISAYMGRQWELSYRLGMRPWICVAYSAPVSAAFAVFLVYPFGQGSFSDGMPLGISGT
HHHHHHHHCCEEEEEEECCCCCEEEEEECCCHHHHEEEEEEEECCCCCCCCCCCEEECCC
FNFMFVFQAEHNILMHPFHMAGVAGMFGGSLFSAMHGSLVTSSLIRETTETESQNYGYKF
EEEEEEEEECCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAVFPVVCVWLTSMGICTMAFNLNG
CCCCCCEEEEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCC
FNFNQSVVDANGKIVPTWGDVLNRANLGMEVMHERNAHNFPLDLAAAESTTVALSAPAIG
CCCCCCEECCCCEEEECHHHHHHHCCCCHHHHHHCCCCCCCEEEECCCCCEEEEECCCCH
>Mature Secondary Structure 
TTIQQQRSSLLKGWPQFCEWVTSTNNRIYVGWFGVLMIPCLLTAAACFIVAFIAAPPVD
CCHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCC
IDGIREPVAGSFLYGNNIISGAVVPSSNAIGLHFYPIWEAATVDEWLYNGGPYQLVIFHF
CCCCCCCCCCCEEECCCEEECEEECCCCCEEEEEEECCCCCHHHHHHHCCCCHHHHHHHH
LIGISAYMGRQWELSYRLGMRPWICVAYSAPVSAAFAVFLVYPFGQGSFSDGMPLGISGT
HHHHHHHHCCEEEEEEECCCCCEEEEEECCCHHHHEEEEEEEECCCCCCCCCCCEEECCC
FNFMFVFQAEHNILMHPFHMAGVAGMFGGSLFSAMHGSLVTSSLIRETTETESQNYGYKF
EEEEEEEEECCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAVFPVVCVWLTSMGICTMAFNLNG
CCCCCCEEEEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCC
FNFNQSVVDANGKIVPTWGDVLNRANLGMEVMHERNAHNFPLDLAAAESTTVALSAPAIG
CCCCCCEECCCCEEEECHHHHHHHCCCCHHHHHHCCCCCCCEEEECCCCCEEEEECCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA