| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is fur [H]
Identifier: 123968665
GI number: 123968665
Start: 952726
End: 953160
Strand: Direct
Name: fur [H]
Synonym: A9601_11321
Alternate gene names: 123968665
Gene position: 952726-953160 (Clockwise)
Preceding gene: 123968663
Following gene: 123968667
Centisome position: 57.05
GC content: 37.47
Gene sequence:
>435_bases ATGATCAAAAATACGGGGAAAAAAAAGATTTCGGAAACAATGGTAACTAAGCCTGACATTACCAAAAGACAAGAACAACT TCTTGAAGAACTTAATAAATGTGAAGATGAACTGAGCGGTCAAGAGTTGCATAGACAATTGATTGAAAGCGGAAAAGCTA TGGGACTGACAACTGTATACAGGAATCTTCAAGTTCTTATAAAGCATGGTTTAATACGTTCTAGACATCTCCCAACAGGA GAGGTTCTTTACACTCCCGTAGATAGAGACATTCATCATTTGACATGTGTTCAATGTGGTGAGACTTCAAAAATGGAAGG GTGCCCTGTAAAAGATATTCATACACCCAAAACAAATCCAAAGAAATTCCAATTGTTGTTCCATACCCTGGAGTATTTCG GACTTTGCCAGAACTGCTATCAAGCACAAAGTTAA
Upstream 100 bases:
>100_bases GTTCCCATAGCTGGACATAGAATTCCTGAAAAAATAGTTATTATTAAGGGAACAAGCCACCAACTGCTATTAATAAAAGA CATTAATCTATTGATTCGGT
Downstream 100 bases:
>100_bases AACTAAATATTTTTTTAATCACAACAATTATTATCCTCAATAGAGCTGATATTTATATCCTCTAATTTATCTTTTATGGA ATCAGGGCTTCCACAGGCCA
Product: ferric uptake regulator family protein
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MIKNTGKKKISETMVTKPDITKRQEQLLEELNKCEDELSGQELHRQLIESGKAMGLTTVYRNLQVLIKHGLIRSRHLPTG EVLYTPVDRDIHHLTCVQCGETSKMEGCPVKDIHTPKTNPKKFQLLFHTLEYFGLCQNCYQAQS
Sequences:
>Translated_144_residues MIKNTGKKKISETMVTKPDITKRQEQLLEELNKCEDELSGQELHRQLIESGKAMGLTTVYRNLQVLIKHGLIRSRHLPTG EVLYTPVDRDIHHLTCVQCGETSKMEGCPVKDIHTPKTNPKKFQLLFHTLEYFGLCQNCYQAQS >Mature_144_residues MIKNTGKKKISETMVTKPDITKRQEQLLEELNKCEDELSGQELHRQLIESGKAMGLTTVYRNLQVLIKHGLIRSRHLPTG EVLYTPVDRDIHHLTCVQCGETSKMEGCPVKDIHTPKTNPKKFQLLFHTLEYFGLCQNCYQAQS
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes. Regulates the expression of the fbp protein [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
None
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 16522; Mature: 16522
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKNTGKKKISETMVTKPDITKRQEQLLEELNKCEDELSGQELHRQLIESGKAMGLTTVY CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHH RNLQVLIKHGLIRSRHLPTGEVLYTPVDRDIHHLTCVQCGETSKMEGCPVKDIHTPKTNP HHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCH KKFQLLFHTLEYFGLCQNCYQAQS HHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIKNTGKKKISETMVTKPDITKRQEQLLEELNKCEDELSGQELHRQLIESGKAMGLTTVY CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHH RNLQVLIKHGLIRSRHLPTGEVLYTPVDRDIHHLTCVQCGETSKMEGCPVKDIHTPKTNP HHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCH KKFQLLFHTLEYFGLCQNCYQAQS HHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8406856 [H]