| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is znuB [C]
Identifier: 123968664
GI number: 123968664
Start: 951923
End: 952708
Strand: Reverse
Name: znuB [C]
Synonym: A9601_11311
Alternate gene names: 123968664
Gene position: 952708-951923 (Counterclockwise)
Preceding gene: 123968666
Following gene: 123968659
Centisome position: 57.05
GC content: 34.61
Gene sequence:
>786_bases ATGTCTTTTATTAATAGCAGTTGGTGGCTTGTTCCCTTAATAATAACTATTTTTTCAGGAATTCTATGTCCAGCTATGGG AACTGTATTAATAACACATAGGAGATTACTTCAAGTAAATTTAATCTCTCACTGCGTTTTGCCAGGACTTGCTTTAGCCT TAGCGCTTGGAATTCATCCTTCAATTGGTGGGGTTATCAGTGGTCTTTTAGGTTCTGTAATTGCGGAAAGTTTAACTAAT AAAAAGAGTGAAAACTATGAAGCAATAATGAACACAATATTAGCCGGAATGCTTGGGTTTGGAGTCCTTATAATCCCTTT ACTTGGAATAAGGATCGATTTGGAGGCAGTATTATTTGGCGATTTATTGACAGCAAATTTTGGAGATTTACTTAGAACAA TAATTGCTTTTTTAGTATTTATACTTTTAATAACTTTTGGATATGAAAAGGTTGTTTATGTGGGAATGGATCCAGAAGGA GCATCCGCGAGTGGTATAAACGTTTCTTTATTAAATCTTGCTTTGAGTTTTACAACGGCATTAGTAATTGTTAGTTCAAT GTCAGCAGTGGGAGTAATTCTTGTTATTGCTCTTCTTTCTACCCCAACACTGTTAGGGCTTAATAAGGCTCATAGTTTAA GAATTGCAATGATGAGGTCTTCATTTTTTGGATTATGTATCTCACTTCTGGGCTTTATTCTATCTATAGTCTTTAATTTG TCGCCTGGACCTGCAATTAGTGTTATTTGTGTCGCATCTCTTTTGATTCCTAAACTTCGTAAATAA
Upstream 100 bases:
>100_bases AGAAGTTGTTCTTGTCTTTTGGTAATGTCAGGCTTAGTTACCATTGTTTCCGAAATCTTTTTTTTCCCCGTATTTTTGAT CATACCGAATCAATAGATTA
Downstream 100 bases:
>100_bases TTAAATCTTAAATGTCCAATCAGAGTTTAATGCTTGAGCTTCTGGATTGTTTTTTAAAGCTAGTTCCATAGCTTCTTTTT TATTATTAGCTATAACAACT
Product: ABC transporter
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MSFINSSWWLVPLIITIFSGILCPAMGTVLITHRRLLQVNLISHCVLPGLALALALGIHPSIGGVISGLLGSVIAESLTN KKSENYEAIMNTILAGMLGFGVLIIPLLGIRIDLEAVLFGDLLTANFGDLLRTIIAFLVFILLITFGYEKVVYVGMDPEG ASASGINVSLLNLALSFTTALVIVSSMSAVGVILVIALLSTPTLLGLNKAHSLRIAMMRSSFFGLCISLLGFILSIVFNL SPGPAISVICVASLLIPKLRK
Sequences:
>Translated_261_residues MSFINSSWWLVPLIITIFSGILCPAMGTVLITHRRLLQVNLISHCVLPGLALALALGIHPSIGGVISGLLGSVIAESLTN KKSENYEAIMNTILAGMLGFGVLIIPLLGIRIDLEAVLFGDLLTANFGDLLRTIIAFLVFILLITFGYEKVVYVGMDPEG ASASGINVSLLNLALSFTTALVIVSSMSAVGVILVIALLSTPTLLGLNKAHSLRIAMMRSSFFGLCISLLGFILSIVFNL SPGPAISVICVASLLIPKLRK >Mature_260_residues SFINSSWWLVPLIITIFSGILCPAMGTVLITHRRLLQVNLISHCVLPGLALALALGIHPSIGGVISGLLGSVIAESLTNK KSENYEAIMNTILAGMLGFGVLIIPLLGIRIDLEAVLFGDLLTANFGDLLRTIIAFLVFILLITFGYEKVVYVGMDPEGA SASGINVSLLNLALSFTTALVIVSSMSAVGVILVIALLSTPTLLGLNKAHSLRIAMMRSSFFGLCISLLGFILSIVFNLS PGPAISVICVASLLIPKLRK
Specific function: Involved In The High-Affinity Zinc Uptake Transport System. [C]
COG id: COG1108
COG function: function code P; ABC-type Mn2+/Zn2+ transport systems, permease components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-3 integral membrane protein family [H]
Homologues:
Organism=Escherichia coli, GI1788166, Length=242, Percent_Identity=24.3801652892562, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001626 [H]
Pfam domain/function: PF00950 ABC-3 [H]
EC number: NA
Molecular weight: Translated: 27601; Mature: 27470
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFINSSWWLVPLIITIFSGILCPAMGTVLITHRRLLQVNLISHCVLPGLALALALGIHP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SIGGVISGLLGSVIAESLTNKKSENYEAIMNTILAGMLGFGVLIIPLLGIRIDLEAVLFG CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLLTANFGDLLRTIIAFLVFILLITFGYEKVVYVGMDPEGASASGINVSLLNLALSFTTA HHHHCCHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHH LVIVSSMSAVGVILVIALLSTPTLLGLNKAHSLRIAMMRSSFFGLCISLLGFILSIVFNL HHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SPGPAISVICVASLLIPKLRK CCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure SFINSSWWLVPLIITIFSGILCPAMGTVLITHRRLLQVNLISHCVLPGLALALALGIHP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SIGGVISGLLGSVIAESLTNKKSENYEAIMNTILAGMLGFGVLIIPLLGIRIDLEAVLFG CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLLTANFGDLLRTIIAFLVFILLITFGYEKVVYVGMDPEGASASGINVSLLNLALSFTTA HHHHCCHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHH LVIVSSMSAVGVILVIALLSTPTLLGLNKAHSLRIAMMRSSFFGLCISLLGFILSIVFNL HHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SPGPAISVICVASLLIPKLRK CCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7927711 [H]