| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968658
Identifier: 123968658
GI number: 123968658
Start: 949165
End: 949584
Strand: Direct
Name: 123968658
Synonym: A9601_11251
Alternate gene names: NA
Gene position: 949165-949584 (Clockwise)
Preceding gene: 123968657
Following gene: 123968660
Centisome position: 56.84
GC content: 30.0
Gene sequence:
>420_bases ATGACTAAAGTTAAATGTTCTTATTTAGGAAATTTAAATTGTGAGGCTATTCATCTACAATCTGGAAGTCTTATTAGAAC TGATGCACCTTTAGATCACTGCGGTAAGGGTGAAAGTTTTTCCCCAACTGATTTATTAGCGACATCTCTAGGTACTTGCC TGCTAACCATTATGGCAATCAAAGCTAAATCGAAAGGATTTGATTTGAAAGGTATATATTTAAATATTGAAAAAGTAATG ACACAACATAGCGAGAGGAAGATAAAAGAACTAATAATAGATATTTTTATACCAGAGAACACTTCTAATGAAACTATTGA TTTTTTGAAAAAAGCTTCCAAAGAATGTCCAGTTACAAGAAATTTATCTCAAGAAATAGATATTAAAATTAGTTGGCATA ATGATAAATCTCTAACATAG
Upstream 100 bases:
>100_bases TTAATACTCCACTAATATGCAAATAAAAATTCTCATCAATAATCTTGTTATGTTCCATAATTTTTTATTAATAATATTTT CCTAATTTAATTTTTCTAAA
Downstream 100 bases:
>100_bases TAATTACAAAAAATATAATGAAATACTTTATTGGAATAGTCCTTCTTTTATTTGGAATATGCATAATGACTGACTTGGCA TTAAAGACTAGGTATACAAG
Product: putative stress-induced protein OsmC
Products: NA
Alternate protein names: Redox Protein; Stress-Induced Protein OsmC; OsmC/Ohr Family Protein; Redox Protein Regulator Of Disulfide Bond Formation; Osmc Family Protein; OsmC-Like Protein; Osmc-Like Protein
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MTKVKCSYLGNLNCEAIHLQSGSLIRTDAPLDHCGKGESFSPTDLLATSLGTCLLTIMAIKAKSKGFDLKGIYLNIEKVM TQHSERKIKELIIDIFIPENTSNETIDFLKKASKECPVTRNLSQEIDIKISWHNDKSLT
Sequences:
>Translated_139_residues MTKVKCSYLGNLNCEAIHLQSGSLIRTDAPLDHCGKGESFSPTDLLATSLGTCLLTIMAIKAKSKGFDLKGIYLNIEKVM TQHSERKIKELIIDIFIPENTSNETIDFLKKASKECPVTRNLSQEIDIKISWHNDKSLT >Mature_138_residues TKVKCSYLGNLNCEAIHLQSGSLIRTDAPLDHCGKGESFSPTDLLATSLGTCLLTIMAIKAKSKGFDLKGIYLNIEKVMT QHSERKIKELIIDIFIPENTSNETIDFLKKASKECPVTRNLSQEIDIKISWHNDKSLT
Specific function: Unknown
COG id: COG1765
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15498; Mature: 15367
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKVKCSYLGNLNCEAIHLQSGSLIRTDAPLDHCGKGESFSPTDLLATSLGTCLLTIMAI CCEEEEEECCCCCCEEEEECCCCEEEECCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH KAKSKGFDLKGIYLNIEKVMTQHSERKIKELIIDIFIPENTSNETIDFLKKASKECPVTR HCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHCCCCCCC NLSQEIDIKISWHNDKSLT CCCCEEEEEEEECCCCCCC >Mature Secondary Structure TKVKCSYLGNLNCEAIHLQSGSLIRTDAPLDHCGKGESFSPTDLLATSLGTCLLTIMAI CEEEEEECCCCCCEEEEECCCCEEEECCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH KAKSKGFDLKGIYLNIEKVMTQHSERKIKELIIDIFIPENTSNETIDFLKKASKECPVTR HCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHCCCCCCC NLSQEIDIKISWHNDKSLT CCCCEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA