Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

Click here to switch to the map view.

The map label for this gene is 123968654

Identifier: 123968654

GI number: 123968654

Start: 947495

End: 947656

Strand: Reverse

Name: 123968654

Synonym: A9601_11211

Alternate gene names: NA

Gene position: 947656-947495 (Counterclockwise)

Preceding gene: 123968655

Following gene: 123968650

Centisome position: 56.75

GC content: 25.93

Gene sequence:

>162_bases
TTGGATAATAAAGAGCCAGAAAATCCAGTAGTTTATCTTTCTAATTTAGTCAAGAAATTAGATGTAAAAAACAGAAATGG
TTTAGTAGCCTTAGCAATAGTAAACCTTTTAGTGATACTTTTATTTAAATTTTATTTGAAAGGATCTGGATTATTATCTT
GA

Upstream 100 bases:

>100_bases
TAAAAATTATTTATTTCTTTTTGGAAATTCATCTTTACAATTTTGATTCTTCAAATGAAACTGTGATATTTTCTTGTCAA
ATTAATATTTAAAACAAAAT

Downstream 100 bases:

>100_bases
ATTTAACTGCTGGTAGTATTATTCAGCATTCTCAAATTGTTTAGCTAATCTAAATGCCTTCTTAATTATTAGAAAGCCAC
CATATGCTCCTGCCAGTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 53; Mature: 53

Protein sequence:

>53_residues
MDNKEPENPVVYLSNLVKKLDVKNRNGLVALAIVNLLVILLFKFYLKGSGLLS

Sequences:

>Translated_53_residues
MDNKEPENPVVYLSNLVKKLDVKNRNGLVALAIVNLLVILLFKFYLKGSGLLS
>Mature_53_residues
MDNKEPENPVVYLSNLVKKLDVKNRNGLVALAIVNLLVILLFKFYLKGSGLLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5915; Mature: 5915

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNKEPENPVVYLSNLVKKLDVKNRNGLVALAIVNLLVILLFKFYLKGSGLLS
CCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDNKEPENPVVYLSNLVKKLDVKNRNGLVALAIVNLLVILLFKFYLKGSGLLS
CCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA