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The map label for this gene is 123968642

Identifier: 123968642

GI number: 123968642

Start: 942973

End: 943266

Strand: Direct

Name: 123968642

Synonym: A9601_11091

Alternate gene names: NA

Gene position: 942973-943266 (Clockwise)

Preceding gene: 123968641

Following gene: 123968644

Centisome position: 56.47

GC content: 22.11

Gene sequence:

>294_bases
ATGAAAAAATTTTATAAATTTCTTAAAAGTTTTCTATTTATATCACTATGGCTTATTTTATCCTCATTTTTAACCCAATA
TTGGAATACCTTTCATTGGGAATATGTTTATTTAAACTTCAGAATTATATTTGATAAAGAATTTTGGTTTGTTGTAGAAA
AAATTCTTTTAGGATTTGATATAGGTTACTGGTTAGAAGAAGCACTAAAATTCTTAAGTTATGAAATACCTAAAGAATCA
TTTAAATATTTACCAATTTATTTCGCATTAAAGTCTATTTGGATAAAGAATTAA

Upstream 100 bases:

>100_bases
ACAATATTTTTATATCTTTTTGAATATATTTAATGGAAATAAAATTTGATCCAAATAATAATAAGGGATATTTGAAATTA
AATAAGACAGTTGCTGGTAT

Downstream 100 bases:

>100_bases
TTTCTATTTTTAATAGATTTTAATAAATTCCTTGAAATTATTGAATAAAGTCGGTGAATTTATTTTTCTTAAAACAAATA
AAGTTCCTTTATCACCTCTA

Product: virion host shutoff protein

Products: NA

Alternate protein names: Virion Host Shutoff Protein-Like

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MKKFYKFLKSFLFISLWLILSSFLTQYWNTFHWEYVYLNFRIIFDKEFWFVVEKILLGFDIGYWLEEALKFLSYEIPKES
FKYLPIYFALKSIWIKN

Sequences:

>Translated_97_residues
MKKFYKFLKSFLFISLWLILSSFLTQYWNTFHWEYVYLNFRIIFDKEFWFVVEKILLGFDIGYWLEEALKFLSYEIPKES
FKYLPIYFALKSIWIKN
>Mature_97_residues
MKKFYKFLKSFLFISLWLILSSFLTQYWNTFHWEYVYLNFRIIFDKEFWFVVEKILLGFDIGYWLEEALKFLSYEIPKES
FKYLPIYFALKSIWIKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12216; Mature: 12216

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFYKFLKSFLFISLWLILSSFLTQYWNTFHWEYVYLNFRIIFDKEFWFVVEKILLGFD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCHHHHHHHHHHHHCC
IGYWLEEALKFLSYEIPKESFKYLPIYFALKSIWIKN
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKFYKFLKSFLFISLWLILSSFLTQYWNTFHWEYVYLNFRIIFDKEFWFVVEKILLGFD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCHHHHHHHHHHHHCC
IGYWLEEALKFLSYEIPKESFKYLPIYFALKSIWIKN
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA