Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

Click here to switch to the map view.

The map label for this gene is 123968622

Identifier: 123968622

GI number: 123968622

Start: 931080

End: 931361

Strand: Direct

Name: 123968622

Synonym: A9601_10891

Alternate gene names: NA

Gene position: 931080-931361 (Clockwise)

Preceding gene: 123968621

Following gene: 123968623

Centisome position: 55.76

GC content: 30.14

Gene sequence:

>282_bases
ATGAGAAATAATATTAATGGTGACTTTTCCATAGTAGAAAAGATATCTGAGTTAAAGCCCGGAGCATTTATAAATATCAA
TTGGAATAAAAAAAAGCTTATGCTCCCATATTCTCTACGAAAAGATTATATTTCCTTTACAGATAAAAAATGGGACTGGA
GGTATCAATTTAATAAGGACGGATCGCCTGATATTAATAATCCTTCTTTATACGAACTACTACCTTCTGGGGAGATTAAA
ACACATTTTTGTGAAACAGAAGATAATAAACCAAACTTATAA

Upstream 100 bases:

>100_bases
AAAAGGAGCTCAAAAAATTCATTCATTTTTTATTACCTCAATACTTTTATTAGCTTTAAATAGTAGCTATGTATGCGAAA
ATTCAAAGCTTAATCTTGTG

Downstream 100 bases:

>100_bases
TTTCAAAATAAGTATTCTAGAATTTTTAACTTCTTAACTTCTTTGTAAAGATGAACAATCCAAAAAACCAAAATAATATT
TCAAGATATGTGAAACTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MRNNINGDFSIVEKISELKPGAFININWNKKKLMLPYSLRKDYISFTDKKWDWRYQFNKDGSPDINNPSLYELLPSGEIK
THFCETEDNKPNL

Sequences:

>Translated_93_residues
MRNNINGDFSIVEKISELKPGAFININWNKKKLMLPYSLRKDYISFTDKKWDWRYQFNKDGSPDINNPSLYELLPSGEIK
THFCETEDNKPNL
>Mature_93_residues
MRNNINGDFSIVEKISELKPGAFININWNKKKLMLPYSLRKDYISFTDKKWDWRYQFNKDGSPDINNPSLYELLPSGEIK
THFCETEDNKPNL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11015; Mature: 11015

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNNINGDFSIVEKISELKPGAFININWNKKKLMLPYSLRKDYISFTDKKWDWRYQFNKD
CCCCCCCCHHHHHHHHHCCCCEEEEEECCCEEEECCHHHCCHHCCCCCCCCEEEEEECCC
GSPDINNPSLYELLPSGEIKTHFCETEDNKPNL
CCCCCCCCCEEEECCCCCEEEEEECCCCCCCCC
>Mature Secondary Structure
MRNNINGDFSIVEKISELKPGAFININWNKKKLMLPYSLRKDYISFTDKKWDWRYQFNKD
CCCCCCCCHHHHHHHHHCCCCEEEEEECCCEEEECCHHHCCHHCCCCCCCCEEEEEECCC
GSPDINNPSLYELLPSGEIKTHFCETEDNKPNL
CCCCCCCCCEEEECCCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA