| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
Click here to switch to the map view.
The map label for this gene is 123968618
Identifier: 123968618
GI number: 123968618
Start: 929122
End: 929502
Strand: Direct
Name: 123968618
Synonym: A9601_10851
Alternate gene names: NA
Gene position: 929122-929502 (Clockwise)
Preceding gene: 123968616
Following gene: 123968619
Centisome position: 55.64
GC content: 31.23
Gene sequence:
>381_bases ATGACTTCCAACTATACCTTTATTTATGATGGAGAATGCCCATTCTGCAATCATTTTGCTGAGCTACTTGAGATCAAAAG CAAGTTAAATAATATTAGAATTCTTGATGGTCGTAAAAATTTAACTTTGATTAAATCCCTCCTAGATAAAGGTTATGACA TTGATAAAGGAGCTATTCTTCTGAAAGATGAAGATATCTTTCATGGAGCAGATGCAATTAACACTATTTGCAAACAGATA AATAATCCCTCAAGTAGTTTACTTTTGTTACTTTCTAGAGTGTTTAAATCAAATAAACGAACAAACTTGATATTTCCTTT ACTCGTCAGAGCCAGAAGATTCGTTTTGATATCAAAAGGTGTATCAATATCCCTAGTTTAA
Upstream 100 bases:
>100_bases CCTTTATAAAAAATCCACAAATTTTTTATTATTTATTTTATTATTGAGTAATTAATGTTTTGTTGGCGCACTTTAAGAAC ATCAAAACTGTTTTTTTCTA
Downstream 100 bases:
>100_bases AAATAAAAACTTTCTAAAAATAAAATAACATATTTATAAGCTTCTGTATCAATAAATGATAATTAATTATTTCTTAGCTA GAACTAAATAGTAACAACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MTSNYTFIYDGECPFCNHFAELLEIKSKLNNIRILDGRKNLTLIKSLLDKGYDIDKGAILLKDEDIFHGADAINTICKQI NNPSSSLLLLLSRVFKSNKRTNLIFPLLVRARRFVLISKGVSISLV
Sequences:
>Translated_126_residues MTSNYTFIYDGECPFCNHFAELLEIKSKLNNIRILDGRKNLTLIKSLLDKGYDIDKGAILLKDEDIFHGADAINTICKQI NNPSSSLLLLLSRVFKSNKRTNLIFPLLVRARRFVLISKGVSISLV >Mature_125_residues TSNYTFIYDGECPFCNHFAELLEIKSKLNNIRILDGRKNLTLIKSLLDKGYDIDKGAILLKDEDIFHGADAINTICKQIN NPSSSLLLLLSRVFKSNKRTNLIFPLLVRARRFVLISKGVSISLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14258; Mature: 14127
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSNYTFIYDGECPFCNHFAELLEIKSKLNNIRILDGRKNLTLIKSLLDKGYDIDKGAIL CCCCCEEEECCCCCHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHCCCCCCCCEEE LKDEDIFHGADAINTICKQINNPSSSLLLLLSRVFKSNKRTNLIFPLLVRARRFVLISKG EECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEEECC VSISLV CEEEEC >Mature Secondary Structure TSNYTFIYDGECPFCNHFAELLEIKSKLNNIRILDGRKNLTLIKSLLDKGYDIDKGAIL CCCCEEEECCCCCHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHCCCCCCCCEEE LKDEDIFHGADAINTICKQINNPSSSLLLLLSRVFKSNKRTNLIFPLLVRARRFVLISKG EECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEEECC VSISLV CEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA