| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968600
Identifier: 123968600
GI number: 123968600
Start: 920992
End: 921450
Strand: Direct
Name: 123968600
Synonym: A9601_10671
Alternate gene names: NA
Gene position: 920992-921450 (Clockwise)
Preceding gene: 123968599
Following gene: 123968601
Centisome position: 55.15
GC content: 28.32
Gene sequence:
>459_bases TTGAGAAAGAAATTATATTTGGCTAATCCATATGGATTTTCAAAACAAACTAAAACCCTCTTAAATGAATTTATTCAAAT CTTCAATGATTTAAATGTAGAAGTATTTGAACCTTTTGAGAGAACAAAACGATTAATACAACAAGAAAGTGAGTGGGCAT ATGAAGTTGCAAGAAGTAATTTTCTTGATTTAAAAGAATGTGATTGTATTTTTGCGATTGTTAATGGAAATCCACCAGAT GAAGGGGTAATGATTGAGTTAGGTATCGCAATTGCTTTAAAAAAGGAAATCTTTTTATTCAGGGATGATTTTAGAAATTG TACTGATAGCAATCAATACCCATTAAACCTAATGTTATTTCTTGGACTGCCTAAAGATAATTGGGAGAAATATTATTTTG AATCATTACAAGATATAAAAAGTAATAAAAAAAGATTTTTGGAGTGGGCTGAAAATTAG
Upstream 100 bases:
>100_bases TTCATCTAACAAAAAAAAGTCAATGGATTGTTTTCCCTTGGGAAAATACTATAAATTCAAAAAGTGACCGCGAAGAATAT ATAAAAAAAAGAGGTTTAAG
Downstream 100 bases:
>100_bases CCAAATAAACCGTCAATATAAAAGTAGAAGTTTAAAGTTTGAATATATCTTTTAAAGTGCTAGAATATATTTTATTTCGA AAATTTTGACACAAGTTACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MRKKLYLANPYGFSKQTKTLLNEFIQIFNDLNVEVFEPFERTKRLIQQESEWAYEVARSNFLDLKECDCIFAIVNGNPPD EGVMIELGIAIALKKEIFLFRDDFRNCTDSNQYPLNLMLFLGLPKDNWEKYYFESLQDIKSNKKRFLEWAEN
Sequences:
>Translated_152_residues MRKKLYLANPYGFSKQTKTLLNEFIQIFNDLNVEVFEPFERTKRLIQQESEWAYEVARSNFLDLKECDCIFAIVNGNPPD EGVMIELGIAIALKKEIFLFRDDFRNCTDSNQYPLNLMLFLGLPKDNWEKYYFESLQDIKSNKKRFLEWAEN >Mature_152_residues MRKKLYLANPYGFSKQTKTLLNEFIQIFNDLNVEVFEPFERTKRLIQQESEWAYEVARSNFLDLKECDCIFAIVNGNPPD EGVMIELGIAIALKKEIFLFRDDFRNCTDSNQYPLNLMLFLGLPKDNWEKYYFESLQDIKSNKKRFLEWAEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18113; Mature: 18113
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKKLYLANPYGFSKQTKTLLNEFIQIFNDLNVEVFEPFERTKRLIQQESEWAYEVARSN CCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHCC FLDLKECDCIFAIVNGNPPDEGVMIELGIAIALKKEIFLFRDDFRNCTDSNQYPLNLMLF CCCCCCCCEEEEEECCCCCCCCEEEEEHHHHHHHHHHHEEHHHHCCCCCCCCCCEEEEEE LGLPKDNWEKYYFESLQDIKSNKKRFLEWAEN EECCCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRKKLYLANPYGFSKQTKTLLNEFIQIFNDLNVEVFEPFERTKRLIQQESEWAYEVARSN CCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHCC FLDLKECDCIFAIVNGNPPDEGVMIELGIAIALKKEIFLFRDDFRNCTDSNQYPLNLMLF CCCCCCCCEEEEEECCCCCCCCEEEEEHHHHHHHHHHHEEHHHHCCCCCCCCCCEEEEEE LGLPKDNWEKYYFESLQDIKSNKKRFLEWAEN EECCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA