| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968597
Identifier: 123968597
GI number: 123968597
Start: 919835
End: 920338
Strand: Direct
Name: 123968597
Synonym: A9601_10641
Alternate gene names: NA
Gene position: 919835-920338 (Clockwise)
Preceding gene: 123968595
Following gene: 123968598
Centisome position: 55.08
GC content: 28.97
Gene sequence:
>504_bases TTGGAGAATACACCGCAATTTCTATTTCTTGCTAGTGGAGTGAATAATGGAGAAGGGTTTTGGATTGTGGGAATAAAAAA TTGCGATGAAAATATCCTTGAGGATGAAAATCTTCTAGATTGCCATAGAAAAGAATTAATCGGTAATGAATCAGCAAAAG ATATTCTTTTAGCTATTAATTTAAACGTAAATAATTTATTAAATGAACTAAGAAACAAAAATTATTTAATTACAAGACCT TCAATGGGGATTCCATTTGATATCCCTTTAGAAATCTTGGAAAATATTTTTGATTTTTGGTTAGATATTTATAAAAATCA TGAAGCCTGGGAAGCTTGTTTAGGACTTCTTAAAGTTAGAAAAAGGATTCCCCTAACAAACCTAATTGAAAGCGAAAGTT TAAAGGGGAAATCTAAAAAATGGGCTATAAAAATTGAAAATTTACATACTTATGTTCCTTCTTCACTTAAAAATGAAAAA TTAAATGACCCCATGTGGGAATAA
Upstream 100 bases:
>100_bases CAAAATTTCTTTTACGAGGACCTCATATTGTTAATTGCACAGCTAAATAATTTTCATATCAAGCAAAAAATGTTAAAAAT GAAAAAAACAATTTGAAATC
Downstream 100 bases:
>100_bases TTTTATCTTTAAATACTAAAAATATTTACTTCGTTGGATATTTAAGTAAAAATAAAATAACAAATAATTTAAAAATGAAT AAACCATATTCTTTTAGTAT
Product: josephin
Products: NA
Alternate protein names: Josephin-Like
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MENTPQFLFLASGVNNGEGFWIVGIKNCDENILEDENLLDCHRKELIGNESAKDILLAINLNVNNLLNELRNKNYLITRP SMGIPFDIPLEILENIFDFWLDIYKNHEAWEACLGLLKVRKRIPLTNLIESESLKGKSKKWAIKIENLHTYVPSSLKNEK LNDPMWE
Sequences:
>Translated_167_residues MENTPQFLFLASGVNNGEGFWIVGIKNCDENILEDENLLDCHRKELIGNESAKDILLAINLNVNNLLNELRNKNYLITRP SMGIPFDIPLEILENIFDFWLDIYKNHEAWEACLGLLKVRKRIPLTNLIESESLKGKSKKWAIKIENLHTYVPSSLKNEK LNDPMWE >Mature_167_residues MENTPQFLFLASGVNNGEGFWIVGIKNCDENILEDENLLDCHRKELIGNESAKDILLAINLNVNNLLNELRNKNYLITRP SMGIPFDIPLEILENIFDFWLDIYKNHEAWEACLGLLKVRKRIPLTNLIESESLKGKSKKWAIKIENLHTYVPSSLKNEK LNDPMWE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19337; Mature: 19337
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENTPQFLFLASGVNNGEGFWIVGIKNCDENILEDENLLDCHRKELIGNESAKDILLAIN CCCCCCEEEEECCCCCCCCEEEEEECCCCCHHHCCCCHHHHHHHHHCCCCCCCEEEEEEE LNVNNLLNELRNKNYLITRPSMGIPFDIPLEILENIFDFWLDIYKNHEAWEACLGLLKVR CCHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH KRIPLTNLIESESLKGKSKKWAIKIENLHTYVPSSLKNEKLNDPMWE HHCCHHHHHHCCCCCCCCCEEEEEECCHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MENTPQFLFLASGVNNGEGFWIVGIKNCDENILEDENLLDCHRKELIGNESAKDILLAIN CCCCCCEEEEECCCCCCCCEEEEEECCCCCHHHCCCCHHHHHHHHHCCCCCCCEEEEEEE LNVNNLLNELRNKNYLITRPSMGIPFDIPLEILENIFDFWLDIYKNHEAWEACLGLLKVR CCHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH KRIPLTNLIESESLKGKSKKWAIKIENLHTYVPSSLKNEKLNDPMWE HHCCHHHHHHCCCCCCCCCEEEEEECCHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA