| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968581
Identifier: 123968581
GI number: 123968581
Start: 910728
End: 911282
Strand: Direct
Name: 123968581
Synonym: A9601_10481
Alternate gene names: NA
Gene position: 910728-911282 (Clockwise)
Preceding gene: 123968580
Following gene: 123968582
Centisome position: 54.54
GC content: 26.49
Gene sequence:
>555_bases ATGACCTCGAATCATTCTGGAGTAATGGAGATAATCTTATATTTCCATAATTTTTATTTTATGAACGAATATAAATGTCC TGTCCCTATAGAGCAACAACCCTCAAATGAATTCATCGAATTATCAAAATCTAAAATTTTTTCTTGGCCAAAAACAAAAA AATCACTTATTCTTATTTTAATAAAGTTCTGGTTAGGAGCTTTCCTTCTATTTCTTGTAATTTCTTCAGGAAGTGTATAT TTTAAAACATCTCTCTTAAAATATACTCTATTAAGTTTTTTTAGCAGCTTATCAATACCTCTTTTAATTTCAATAAGGTT ATATTTAGGATGGAATCATATTTTTAAAAGATTAAGATCAGAAAAAGTTGAATACGAGGAATCGGGTTGGTATGACGGCC AAGTTTGGGAAAAACCATTAGTTTTAAAAGAAAAAGAATCACTTATTGCCTCAATTGAGGTAAAGCCTATTTTAAAAAAT TTAATTCAAATTTTTTCTATTATTTCAGTCTTAGCTTTATCGGGAATTTTAATTTTTCAATACATTAATTTTTAA
Upstream 100 bases:
>100_bases GAACCATTACGCAAAGAAGGGGTTAACGAAGCGAAATGGGCTTTACTCGATTATGGTGATTTGATTGTAAATATTTTTCA ACCAGAGATAAGAAAATTTT
Downstream 100 bases:
>100_bases ATGAGTTCTAATTTCAAAAACCTCTACACCTCTAACAATCCTCCTTTACAAGCAACCTTAATGAGAGGGTCAAATATTGA ATCAATACATAAAATTCATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MTSNHSGVMEIILYFHNFYFMNEYKCPVPIEQQPSNEFIELSKSKIFSWPKTKKSLILILIKFWLGAFLLFLVISSGSVY FKTSLLKYTLLSFFSSLSIPLLISIRLYLGWNHIFKRLRSEKVEYEESGWYDGQVWEKPLVLKEKESLIASIEVKPILKN LIQIFSIISVLALSGILIFQYINF
Sequences:
>Translated_184_residues MTSNHSGVMEIILYFHNFYFMNEYKCPVPIEQQPSNEFIELSKSKIFSWPKTKKSLILILIKFWLGAFLLFLVISSGSVY FKTSLLKYTLLSFFSSLSIPLLISIRLYLGWNHIFKRLRSEKVEYEESGWYDGQVWEKPLVLKEKESLIASIEVKPILKN LIQIFSIISVLALSGILIFQYINF >Mature_183_residues TSNHSGVMEIILYFHNFYFMNEYKCPVPIEQQPSNEFIELSKSKIFSWPKTKKSLILILIKFWLGAFLLFLVISSGSVYF KTSLLKYTLLSFFSSLSIPLLISIRLYLGWNHIFKRLRSEKVEYEESGWYDGQVWEKPLVLKEKESLIASIEVKPILKNL IQIFSIISVLALSGILIFQYINF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21536; Mature: 21405
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSNHSGVMEIILYFHNFYFMNEYKCPVPIEQQPSNEFIELSKSKIFSWPKTKKSLILIL CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHH IKFWLGAFLLFLVISSGSVYFKTSLLKYTLLSFFSSLSIPLLISIRLYLGWNHIFKRLRS HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHH EKVEYEESGWYDGQVWEKPLVLKEKESLIASIEVKPILKNLIQIFSIISVLALSGILIFQ HCCCHHCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YINF HHCC >Mature Secondary Structure TSNHSGVMEIILYFHNFYFMNEYKCPVPIEQQPSNEFIELSKSKIFSWPKTKKSLILIL CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHH IKFWLGAFLLFLVISSGSVYFKTSLLKYTLLSFFSSLSIPLLISIRLYLGWNHIFKRLRS HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHH EKVEYEESGWYDGQVWEKPLVLKEKESLIASIEVKPILKNLIQIFSIISVLALSGILIFQ HCCCHHCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YINF HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA