Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

Click here to switch to the map view.

The map label for this gene is 123968581

Identifier: 123968581

GI number: 123968581

Start: 910728

End: 911282

Strand: Direct

Name: 123968581

Synonym: A9601_10481

Alternate gene names: NA

Gene position: 910728-911282 (Clockwise)

Preceding gene: 123968580

Following gene: 123968582

Centisome position: 54.54

GC content: 26.49

Gene sequence:

>555_bases
ATGACCTCGAATCATTCTGGAGTAATGGAGATAATCTTATATTTCCATAATTTTTATTTTATGAACGAATATAAATGTCC
TGTCCCTATAGAGCAACAACCCTCAAATGAATTCATCGAATTATCAAAATCTAAAATTTTTTCTTGGCCAAAAACAAAAA
AATCACTTATTCTTATTTTAATAAAGTTCTGGTTAGGAGCTTTCCTTCTATTTCTTGTAATTTCTTCAGGAAGTGTATAT
TTTAAAACATCTCTCTTAAAATATACTCTATTAAGTTTTTTTAGCAGCTTATCAATACCTCTTTTAATTTCAATAAGGTT
ATATTTAGGATGGAATCATATTTTTAAAAGATTAAGATCAGAAAAAGTTGAATACGAGGAATCGGGTTGGTATGACGGCC
AAGTTTGGGAAAAACCATTAGTTTTAAAAGAAAAAGAATCACTTATTGCCTCAATTGAGGTAAAGCCTATTTTAAAAAAT
TTAATTCAAATTTTTTCTATTATTTCAGTCTTAGCTTTATCGGGAATTTTAATTTTTCAATACATTAATTTTTAA

Upstream 100 bases:

>100_bases
GAACCATTACGCAAAGAAGGGGTTAACGAAGCGAAATGGGCTTTACTCGATTATGGTGATTTGATTGTAAATATTTTTCA
ACCAGAGATAAGAAAATTTT

Downstream 100 bases:

>100_bases
ATGAGTTCTAATTTCAAAAACCTCTACACCTCTAACAATCCTCCTTTACAAGCAACCTTAATGAGAGGGTCAAATATTGA
ATCAATACATAAAATTCATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MTSNHSGVMEIILYFHNFYFMNEYKCPVPIEQQPSNEFIELSKSKIFSWPKTKKSLILILIKFWLGAFLLFLVISSGSVY
FKTSLLKYTLLSFFSSLSIPLLISIRLYLGWNHIFKRLRSEKVEYEESGWYDGQVWEKPLVLKEKESLIASIEVKPILKN
LIQIFSIISVLALSGILIFQYINF

Sequences:

>Translated_184_residues
MTSNHSGVMEIILYFHNFYFMNEYKCPVPIEQQPSNEFIELSKSKIFSWPKTKKSLILILIKFWLGAFLLFLVISSGSVY
FKTSLLKYTLLSFFSSLSIPLLISIRLYLGWNHIFKRLRSEKVEYEESGWYDGQVWEKPLVLKEKESLIASIEVKPILKN
LIQIFSIISVLALSGILIFQYINF
>Mature_183_residues
TSNHSGVMEIILYFHNFYFMNEYKCPVPIEQQPSNEFIELSKSKIFSWPKTKKSLILILIKFWLGAFLLFLVISSGSVYF
KTSLLKYTLLSFFSSLSIPLLISIRLYLGWNHIFKRLRSEKVEYEESGWYDGQVWEKPLVLKEKESLIASIEVKPILKNL
IQIFSIISVLALSGILIFQYINF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21536; Mature: 21405

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSNHSGVMEIILYFHNFYFMNEYKCPVPIEQQPSNEFIELSKSKIFSWPKTKKSLILIL
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHH
IKFWLGAFLLFLVISSGSVYFKTSLLKYTLLSFFSSLSIPLLISIRLYLGWNHIFKRLRS
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHH
EKVEYEESGWYDGQVWEKPLVLKEKESLIASIEVKPILKNLIQIFSIISVLALSGILIFQ
HCCCHHCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YINF
HHCC
>Mature Secondary Structure 
TSNHSGVMEIILYFHNFYFMNEYKCPVPIEQQPSNEFIELSKSKIFSWPKTKKSLILIL
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHH
IKFWLGAFLLFLVISSGSVYFKTSLLKYTLLSFFSSLSIPLLISIRLYLGWNHIFKRLRS
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHH
EKVEYEESGWYDGQVWEKPLVLKEKESLIASIEVKPILKNLIQIFSIISVLALSGILIFQ
HCCCHHCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YINF
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA