| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is cbbY [H]
Identifier: 123968551
GI number: 123968551
Start: 879071
End: 879832
Strand: Reverse
Name: cbbY [H]
Synonym: A9601_10181
Alternate gene names: 123968551
Gene position: 879832-879071 (Counterclockwise)
Preceding gene: 123968562
Following gene: 123968550
Centisome position: 52.69
GC content: 29.13
Gene sequence:
>762_bases GTGACATATCTGGAGGGTGTTTATTGGGATTTAGATGGTACCATCGCAAATACTGAATTAGAGGCCCATTTGCCGGCCTT TAATAATTCTTTTAATGACCTTGGTATTAATTGGAATTGGGATACAAATACATATATAAAACTTCTGAAGATAAATGGGG GTAGAAATAGGATTGCTTATTACGCTAAATCTAATAATGATAATTTCTCAAAAGATTTAATTCTCAAAATTCATGAAACA AAGCAGTATCATTATTTAGAACTTATAAAAAAAAATTGCGTTAGTTTAAAAACTGGAGTTTTTAGATTAATAAATGAATT ACATAAAAAAAAAGTAAGACAATTTATTGTTACTTCAAGTTCAAGAATTCAAGTCAATCTACTTGTTGCTTATCTTTTTA ATGGCTTCAACCCTTTTGAGTTCATTATTTCAAGTGAAGACGTTGAATTAAAGAAACCAAATCCATTGCCATATTTAAAG GCAATCCAATTGAGTGGTATAAACAAAAACAACTCAATTGTTTTTGAAGACTCCAATCCAGGATTGAAATCTTCCTTGTC AGCTAACTTGCCAACAATTTTTGTTCCCTCAAATATCCCAATTGTTCTTGAAGAAAATATTAAATTAGATTGTATTTTAG ACAGTCTTGGTGATCAGAATAATGTGGCAAATGTAATCAAAGGCCCTAAACTAAAAAAATCATATGTTGACTATAACTTT CTATGTGATTATTTAGTCTCTTTTAGTAATGCAAAAAACTAA
Upstream 100 bases:
>100_bases ATTAATTATGGCAACACTTATTCCTTTGGCTGTAGTTGCGTTAGCAGGACCAGCAATAATTGCTCTTGTATTTTACCGTA AATAAAAGATATTCTTTTTG
Downstream 100 bases:
>100_bases TTTTTCCAGAATTACTTACCAGTTAAATAATTTATTTTTTGGTTTTCTAAGTGATACTTGGAGAACAAAATCTATTAGTC TAATTTCTGTTTTGACAGGT
Product: putative CbbY-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MTYLEGVYWDLDGTIANTELEAHLPAFNNSFNDLGINWNWDTNTYIKLLKINGGRNRIAYYAKSNNDNFSKDLILKIHET KQYHYLELIKKNCVSLKTGVFRLINELHKKKVRQFIVTSSSRIQVNLLVAYLFNGFNPFEFIISSEDVELKKPNPLPYLK AIQLSGINKNNSIVFEDSNPGLKSSLSANLPTIFVPSNIPIVLEENIKLDCILDSLGDQNNVANVIKGPKLKKSYVDYNF LCDYLVSFSNAKN
Sequences:
>Translated_253_residues MTYLEGVYWDLDGTIANTELEAHLPAFNNSFNDLGINWNWDTNTYIKLLKINGGRNRIAYYAKSNNDNFSKDLILKIHET KQYHYLELIKKNCVSLKTGVFRLINELHKKKVRQFIVTSSSRIQVNLLVAYLFNGFNPFEFIISSEDVELKKPNPLPYLK AIQLSGINKNNSIVFEDSNPGLKSSLSANLPTIFVPSNIPIVLEENIKLDCILDSLGDQNNVANVIKGPKLKKSYVDYNF LCDYLVSFSNAKN >Mature_252_residues TYLEGVYWDLDGTIANTELEAHLPAFNNSFNDLGINWNWDTNTYIKLLKINGGRNRIAYYAKSNNDNFSKDLILKIHETK QYHYLELIKKNCVSLKTGVFRLINELHKKKVRQFIVTSSSRIQVNLLVAYLFNGFNPFEFIISSEDVELKKPNPLPYLKA IQLSGINKNNSIVFEDSNPGLKSSLSANLPTIFVPSNIPIVLEENIKLDCILDSLGDQNNVANVIKGPKLKKSYVDYNFL CDYLVSFSNAKN
Specific function: Unknown
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 28835; Mature: 28704
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYLEGVYWDLDGTIANTELEAHLPAFNNSFNDLGINWNWDTNTYIKLLKINGGRNRIAY CCCCCEEEEECCCEEECCEEEEECCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCEEEE YAKSNNDNFSKDLILKIHETKQYHYLELIKKNCVSLKTGVFRLINELHKKKVRQFIVTSS EEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SRIQVNLLVAYLFNGFNPFEFIISSEDVELKKPNPLPYLKAIQLSGINKNNSIVFEDSNP CEEEEEEEEEHHHCCCCHHEEEEECCCEEEECCCCCCCEEEEEEECCCCCCCEEEECCCC GLKSSLSANLPTIFVPSNIPIVLEENIKLDCILDSLGDQNNVANVIKGPKLKKSYVDYNF CCHHHHCCCCCEEEECCCCCEEEECCCEEEEEEECCCCCCCHHHHHCCCCCHHHHCCHHH LCDYLVSFSNAKN HHHHHHHHCCCCC >Mature Secondary Structure TYLEGVYWDLDGTIANTELEAHLPAFNNSFNDLGINWNWDTNTYIKLLKINGGRNRIAY CCCCEEEEECCCEEECCEEEEECCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCEEEE YAKSNNDNFSKDLILKIHETKQYHYLELIKKNCVSLKTGVFRLINELHKKKVRQFIVTSS EEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SRIQVNLLVAYLFNGFNPFEFIISSEDVELKKPNPLPYLKAIQLSGINKNNSIVFEDSNP CEEEEEEEEEHHHCCCCHHEEEEECCCEEEECCCCCCCEEEEEEECCCCCCCEEEECCCC GLKSSLSANLPTIFVPSNIPIVLEENIKLDCILDSLGDQNNVANVIKGPKLKKSYVDYNF CCHHHHCCCCCEEEECCCCCEEEECCCEEEEEEECCCCCCCHHHHHCCCCCHHHHCCHHH LCDYLVSFSNAKN HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA