| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968522
Identifier: 123968522
GI number: 123968522
Start: 860440
End: 861450
Strand: Direct
Name: 123968522
Synonym: A9601_09891
Alternate gene names: NA
Gene position: 860440-861450 (Clockwise)
Preceding gene: 123968520
Following gene: 161353815
Centisome position: 51.53
GC content: 30.07
Gene sequence:
>1011_bases TTGAATATTCCTGAAAATTCAAATACAAAAAGAATTTCAATTGATTTACCTGAGGAACTAATTTCCAGGTTTGATCAATT ACGAAAAGAGTGGGGATTTAGAGCAAGAGGGCCTGTAATAGAAAAGATACTGAAAGAACTTCTTCAAGAAGATGATTTAC TACCTAAGAACCAACAGCAAGAAATAGACTTTAACGAGAATAATAATAAAGAAAATTTAAATATTGATGAAGATACTGCA TTGGTATTAATTAAATCAGACGTAAAAAAAGAAGTTAATGAGATATCTTTGAATAAAAGATTTAAAAATAACAATCAATC TAAGGAAAAAACCAACTCAAACATAAGCCTTCCCAATTTTGTTGAAAAAAAAGTAAGGAATCTAAGAAGAAGTATTAATA GTGAAAAATTAAAGGATAATATTAATGATATTCAAATTAATACAATTAAAGAAACTGAATTAATAAAATGTCGAATTGAG TTAATTAGTCATTGGAAAACCTTATATGGATCAGTTCCTAATGATCATGTAGTAGAAGCTTCGATGGATTGGTTTGAAAG GGATATATGGCCAAATCTTGATGGAACTGAAAATCTGACCTTTACGTGGTGTGCAGCCAATAAATTAATGTCAGAATTAT GCCCATTTTGGATAAAGAAAAATCCATCCCTTGAAATTGTTTTATTAATGATTGGCGTTTTAGAAGACCCTTTTGCTACA TCAGACCTGATAAATAGAATACCAACACTTATGAGAAGGTTTATAAGTAGATTTAAGCGAAATAATAGATCAAATTCATT TGAAACTTTGGACTCAACAATGTCAGTACATGGAGCACTTAAATTATTGAATTTATCAACATCCGCAGGATCTGCTCATA CGTTCCGTAAAATTAGGGAGGCCTATAAATCAATAGCCTTAGAGACTCATCCAGATGCTGGAGGATCAACAGATCAAATG AGAAAATTAAATGAAGCCTATCAATTGCTAAAAAATCTATATAGAAAATAG
Upstream 100 bases:
>100_bases AAAAATAAATTGTTTTTAATTTAAAAACAATATTTCGTATAGACTTTCAATTTTTTTTGAATAAAATTAAATAAATTCCA TACTATTCAAGAAAATATTA
Downstream 100 bases:
>100_bases TATACTAATTCTCAAATAAGACTAATTATAAGTCTATTCAATAGTCTTATATAAGATAGCCGCTAATTTGAAATTTTTTA ATTTTTGTCAATTATTATTA
Product: DnaJ domain-containing protein
Products: NA
Alternate protein names: Chaperone; Heat Shock Protein DNAJ N-Terminal Domain Protein; Chaperone Containing DNAj Domain; Cyanobacteria-Specific Chaperone Containing DNAj Domain; DNAJ Domain
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MNIPENSNTKRISIDLPEELISRFDQLRKEWGFRARGPVIEKILKELLQEDDLLPKNQQQEIDFNENNNKENLNIDEDTA LVLIKSDVKKEVNEISLNKRFKNNNQSKEKTNSNISLPNFVEKKVRNLRRSINSEKLKDNINDIQINTIKETELIKCRIE LISHWKTLYGSVPNDHVVEASMDWFERDIWPNLDGTENLTFTWCAANKLMSELCPFWIKKNPSLEIVLLMIGVLEDPFAT SDLINRIPTLMRRFISRFKRNNRSNSFETLDSTMSVHGALKLLNLSTSAGSAHTFRKIREAYKSIALETHPDAGGSTDQM RKLNEAYQLLKNLYRK
Sequences:
>Translated_336_residues MNIPENSNTKRISIDLPEELISRFDQLRKEWGFRARGPVIEKILKELLQEDDLLPKNQQQEIDFNENNNKENLNIDEDTA LVLIKSDVKKEVNEISLNKRFKNNNQSKEKTNSNISLPNFVEKKVRNLRRSINSEKLKDNINDIQINTIKETELIKCRIE LISHWKTLYGSVPNDHVVEASMDWFERDIWPNLDGTENLTFTWCAANKLMSELCPFWIKKNPSLEIVLLMIGVLEDPFAT SDLINRIPTLMRRFISRFKRNNRSNSFETLDSTMSVHGALKLLNLSTSAGSAHTFRKIREAYKSIALETHPDAGGSTDQM RKLNEAYQLLKNLYRK >Mature_336_residues MNIPENSNTKRISIDLPEELISRFDQLRKEWGFRARGPVIEKILKELLQEDDLLPKNQQQEIDFNENNNKENLNIDEDTA LVLIKSDVKKEVNEISLNKRFKNNNQSKEKTNSNISLPNFVEKKVRNLRRSINSEKLKDNINDIQINTIKETELIKCRIE LISHWKTLYGSVPNDHVVEASMDWFERDIWPNLDGTENLTFTWCAANKLMSELCPFWIKKNPSLEIVLLMIGVLEDPFAT SDLINRIPTLMRRFISRFKRNNRSNSFETLDSTMSVHGALKLLNLSTSAGSAHTFRKIREAYKSIALETHPDAGGSTDQM RKLNEAYQLLKNLYRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39062; Mature: 39062
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: PS50076 DNAJ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIPENSNTKRISIDLPEELISRFDQLRKEWGFRARGPVIEKILKELLQEDDLLPKNQQQ CCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC EIDFNENNNKENLNIDEDTALVLIKSDVKKEVNEISLNKRFKNNNQSKEKTNSNISLPNF CCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHH VEKKVRNLRRSINSEKLKDNINDIQINTIKETELIKCRIELISHWKTLYGSVPNDHVVEA HHHHHHHHHHHHCHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCEEHH SMDWFERDIWPNLDGTENLTFTWCAANKLMSELCPFWIKKNPSLEIVLLMIGVLEDPFAT HHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHCCCCCH SDLINRIPTLMRRFISRFKRNNRSNSFETLDSTMSVHGALKLLNLSTSAGSAHTFRKIRE HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHH AYKSIALETHPDAGGSTDQMRKLNEAYQLLKNLYRK HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNIPENSNTKRISIDLPEELISRFDQLRKEWGFRARGPVIEKILKELLQEDDLLPKNQQQ CCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC EIDFNENNNKENLNIDEDTALVLIKSDVKKEVNEISLNKRFKNNNQSKEKTNSNISLPNF CCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHH VEKKVRNLRRSINSEKLKDNINDIQINTIKETELIKCRIELISHWKTLYGSVPNDHVVEA HHHHHHHHHHHHCHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCEEHH SMDWFERDIWPNLDGTENLTFTWCAANKLMSELCPFWIKKNPSLEIVLLMIGVLEDPFAT HHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHCCCCCH SDLINRIPTLMRRFISRFKRNNRSNSFETLDSTMSVHGALKLLNLSTSAGSAHTFRKIRE HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHH AYKSIALETHPDAGGSTDQMRKLNEAYQLLKNLYRK HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA