| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
Click here to switch to the map view.
The map label for this gene is 123968490
Identifier: 123968490
GI number: 123968490
Start: 824392
End: 824694
Strand: Reverse
Name: 123968490
Synonym: A9601_09571
Alternate gene names: NA
Gene position: 824694-824392 (Counterclockwise)
Preceding gene: 123968491
Following gene: 123968489
Centisome position: 49.39
GC content: 30.03
Gene sequence:
>303_bases TTGCACGAACTTTCATTTGGAACTTGGTTAATTCACATCTCTTCGGTCATTGAATGGATATTTACCATCTTTGTTATAAA CAAAATTTCTAAATATAAAAAATACAATTTATTTTTTTGGTTAAGCTTAGCTATGGTTCCTAACTTAATAGGAGCTATGT GCGCTATTACCTGGCATATTTATGACAATCAAGAAAATCTATACGGTCTAGTATCACTTCAAGGAATATTTACATTTATA GGAAATTCAACATTAGCCTTAGCTGCTATAAAGATTTTTAGAGGAGAAGAGACTTATGAATGA
Upstream 100 bases:
>100_bases GATTTCTCCAAAAGGTGAAATTTCTTATAGATGGATAAGTGTTTTACCTATAAATCATGCCAAAGAAGTACTTAATGTAC TAAAGAAAAAAATATAAATT
Downstream 100 bases:
>100_bases TTTATTTTTTAAATTTATAGAGAAATTAGGTTCTATTGATAACACATTATTGTTTGCAGTATCAATAATTCCATATGCAA TATTTTTGTTTTACTTATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MHELSFGTWLIHISSVIEWIFTIFVINKISKYKKYNLFFWLSLAMVPNLIGAMCAITWHIYDNQENLYGLVSLQGIFTFI GNSTLALAAIKIFRGEETYE
Sequences:
>Translated_100_residues MHELSFGTWLIHISSVIEWIFTIFVINKISKYKKYNLFFWLSLAMVPNLIGAMCAITWHIYDNQENLYGLVSLQGIFTFI GNSTLALAAIKIFRGEETYE >Mature_100_residues MHELSFGTWLIHISSVIEWIFTIFVINKISKYKKYNLFFWLSLAMVPNLIGAMCAITWHIYDNQENLYGLVSLQGIFTFI GNSTLALAAIKIFRGEETYE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ycf49 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019634 [H]
Pfam domain/function: PF10693 DUF2499 [H]
EC number: NA
Molecular weight: Translated: 11600; Mature: 11600
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHELSFGTWLIHISSVIEWIFTIFVINKISKYKKYNLFFWLSLAMVPNLIGAMCAITWHI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE YDNQENLYGLVSLQGIFTFIGNSTLALAAIKIFRGEETYE EECCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MHELSFGTWLIHISSVIEWIFTIFVINKISKYKKYNLFFWLSLAMVPNLIGAMCAITWHI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE YDNQENLYGLVSLQGIFTFIGNSTLALAAIKIFRGEETYE EECCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]