| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968449
Identifier: 123968449
GI number: 123968449
Start: 789465
End: 789914
Strand: Reverse
Name: 123968449
Synonym: A9601_09161
Alternate gene names: NA
Gene position: 789914-789465 (Counterclockwise)
Preceding gene: 123968450
Following gene: 123968439
Centisome position: 47.3
GC content: 33.33
Gene sequence:
>450_bases ATGAAAAGAAAACAATCAAAAAAAAAGACACAAAACAAAAAGAAAAAAAACTATTCTGAAACAACTGCTTTCGCTAATCT AGAAAAAACATCTATTCCTGTAACCAAGCCAAAGCGATCATCAAGTGGCATCCCAAAATATGTTGCTGACAGAATGGCAA GAAGAATATTCTTTACAGCTGGAATACCGACAATATTAGGAATGTCTGTTTTTGTTGTTAGCTACATTATAGTTACAAGA AATATTGCCGAAATACCTCCTTCATCAACAATTGCTATTTCAGCATTGTTTTTCTTGTTAGGTCTGGCAGGATTGAGTTT TGGAATATTATCGGCTAGTTGGGATAAAGAACCTGGATCTTTTTTTGGTATTGAAAATATTCCAATGAACATACAACGTG CAAAAGCAGCCTTCAAACCTGCAACTCAAAATTTCGAGGATAAAAATTAA
Upstream 100 bases:
>100_bases TGGTAAAAGGAAAAGATTATTGTCTTACTTAAAAGACAAAAACGTTCAAAAATATCAAGAACTAGTTAAGAAAATTGGAA TCAGAGGATGATCTCAATTA
Downstream 100 bases:
>100_bases TCTAGGAAACTAAAGATTTCAAGTTAACTTTAAATGATTTATCTTCTAATAATTTGCATGCTCCCTGAATATCACCAATA CAAAATTGTTCGCCAAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MKRKQSKKKTQNKKKKNYSETTAFANLEKTSIPVTKPKRSSSGIPKYVADRMARRIFFTAGIPTILGMSVFVVSYIIVTR NIAEIPPSSTIAISALFFLLGLAGLSFGILSASWDKEPGSFFGIENIPMNIQRAKAAFKPATQNFEDKN
Sequences:
>Translated_149_residues MKRKQSKKKTQNKKKKNYSETTAFANLEKTSIPVTKPKRSSSGIPKYVADRMARRIFFTAGIPTILGMSVFVVSYIIVTR NIAEIPPSSTIAISALFFLLGLAGLSFGILSASWDKEPGSFFGIENIPMNIQRAKAAFKPATQNFEDKN >Mature_149_residues MKRKQSKKKTQNKKKKNYSETTAFANLEKTSIPVTKPKRSSSGIPKYVADRMARRIFFTAGIPTILGMSVFVVSYIIVTR NIAEIPPSSTIAISALFFLLGLAGLSFGILSASWDKEPGSFFGIENIPMNIQRAKAAFKPATQNFEDKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16495; Mature: 16495
Theoretical pI: Translated: 11.07; Mature: 11.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRKQSKKKTQNKKKKNYSETTAFANLEKTSIPVTKPKRSSSGIPKYVADRMARRIFFTA CCCCHHHHHHHHHHHHCHHHHHHHHCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC GIPTILGMSVFVVSYIIVTRNIAEIPPSSTIAISALFFLLGLAGLSFGILSASWDKEPGS CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC FFGIENIPMNIQRAKAAFKPATQNFEDKN EECCCCCCCHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKRKQSKKKTQNKKKKNYSETTAFANLEKTSIPVTKPKRSSSGIPKYVADRMARRIFFTA CCCCHHHHHHHHHHHHCHHHHHHHHCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC GIPTILGMSVFVVSYIIVTRNIAEIPPSSTIAISALFFLLGLAGLSFGILSASWDKEPGS CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC FFGIENIPMNIQRAKAAFKPATQNFEDKN EECCCCCCCHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA