Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

Click here to switch to the map view.

The map label for this gene is 123968413

Identifier: 123968413

GI number: 123968413

Start: 757933

End: 758331

Strand: Direct

Name: 123968413

Synonym: A9601_08801

Alternate gene names: NA

Gene position: 757933-758331 (Clockwise)

Preceding gene: 123968410

Following gene: 123968414

Centisome position: 45.39

GC content: 26.32

Gene sequence:

>399_bases
ATGCCTACCAAGAAAAAAAGAGTTGGTTTTATTCCTAGAGATGATGTTATGAGAATAATTCAAAAGTTGAGCACAGAGAA
CAATTTAAGTAATTCAAAAATAATAAGTATTTTGGTAGAAGAAGCACTTTCTATAAGAGGTATATTTAATAAAAAAGATG
GTAAAGTAACTCAATCATATCAATCAAATGAGGATAATTCAAAAAACTTAATTGATAAATCTGGTGACTTTACAGATAAT
GCAAAACTCTCAATTGATACTAACTTGGGAAATCATATTATTCCTAGTAAATTAACCCATTTAAATGAAGAGAATCAGGA
AGCTTTTGACTTGCAAACTTATAAAAAGTTTTTATCATTCCTAAAATTTCAGGAAATGATGAATAAATATAACTCTTAA

Upstream 100 bases:

>100_bases
GAGTAATGTTGTTGGTAAGATCATTAGCATTAAATTGACTTATAATGAATATAGTGCAACACTTATTACAGTCAAGTGCT
GAACTTTAATTAATTTTTAA

Downstream 100 bases:

>100_bases
TAAAGTGTTGCTAAGTGATGAACTGTGCGTTAAATTCAATTTATACATATAGGAGATTCGCATATAAAGATTATTTTTCA
TCATTTCAAAAACCTAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MPTKKKRVGFIPRDDVMRIIQKLSTENNLSNSKIISILVEEALSIRGIFNKKDGKVTQSYQSNEDNSKNLIDKSGDFTDN
AKLSIDTNLGNHIIPSKLTHLNEENQEAFDLQTYKKFLSFLKFQEMMNKYNS

Sequences:

>Translated_132_residues
MPTKKKRVGFIPRDDVMRIIQKLSTENNLSNSKIISILVEEALSIRGIFNKKDGKVTQSYQSNEDNSKNLIDKSGDFTDN
AKLSIDTNLGNHIIPSKLTHLNEENQEAFDLQTYKKFLSFLKFQEMMNKYNS
>Mature_131_residues
PTKKKRVGFIPRDDVMRIIQKLSTENNLSNSKIISILVEEALSIRGIFNKKDGKVTQSYQSNEDNSKNLIDKSGDFTDNA
KLSIDTNLGNHIIPSKLTHLNEENQEAFDLQTYKKFLSFLKFQEMMNKYNS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15189; Mature: 15058

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTKKKRVGFIPRDDVMRIIQKLSTENNLSNSKIISILVEEALSIRGIFNKKDGKVTQSY
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
QSNEDNSKNLIDKSGDFTDNAKLSIDTNLGNHIIPSKLTHLNEENQEAFDLQTYKKFLSF
CCCCCCCCHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHH
LKFQEMMNKYNS
HHHHHHHHHHCC
>Mature Secondary Structure 
PTKKKRVGFIPRDDVMRIIQKLSTENNLSNSKIISILVEEALSIRGIFNKKDGKVTQSY
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
QSNEDNSKNLIDKSGDFTDNAKLSIDTNLGNHIIPSKLTHLNEENQEAFDLQTYKKFLSF
CCCCCCCCHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHH
LKFQEMMNKYNS
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA