| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
Click here to switch to the map view.
The map label for this gene is 123968396
Identifier: 123968396
GI number: 123968396
Start: 748157
End: 748768
Strand: Direct
Name: 123968396
Synonym: A9601_08631
Alternate gene names: NA
Gene position: 748157-748768 (Clockwise)
Preceding gene: 123968394
Following gene: 123968400
Centisome position: 44.8
GC content: 29.41
Gene sequence:
>612_bases ATGCAGCCTCATAGCCTAAAGCTATTTCCAGAATCTGATTTGATAAATTCAATTAAAGAATATTCTTTATCGAATAATTT ATACGGGTATGTTTCTGGAGTGGTTGGTAATCTTAGAACAGTTTGTATTCAATGCCCAGGTAATCAAGAGATAAATAAAT TTGAAGGAAATTTAGAGATAGTTTCTTTAAACGGGCATTTTAATAAAGGAGATGTTCATTTACATTTGAGTTTTGCAGAT GAGGGATGTAATGTTTTTGGCGGGCATCTTGAGGAGGGATGTATTGTAAAAAAAGGTACTGATATATTATTACTTTCTTT TGAACAGAAAATTATTAATATCTCAAATCATGATTTAATCACTAATGAATCACGTGTAAAAGCATATATTTTAAAGGATT GTCCTTGGTCTAAAAGAGCAATTAGGTTACTTAATTCTTTATCTATCCCTCATAAAGTTACTCTAATAGACAATGATGAG AGCTTTCAAAAAATTATGGCTCAAAGTAGCCATAATACTTTCCCTCAAATATTTTTGGATAATAAATTTTTTGGAGGATA TGATGAACTTTCAGAACAAGCAAAATTGGATAACTTAATTTCATTTAAGTAA
Upstream 100 bases:
>100_bases ATTCTAAAATTCAATTTATATCTGAATTCTAAAGATTATAAACTCAACTTCTCTTTATGAATGATGATGTTTTATATTAC AAAATTATTCCTTATATCTA
Downstream 100 bases:
>100_bases TCTAAATTTTTTAACTATCACGATTAGTAAGTTTTTCAGCAACTAATTCGTCCTCTAACTGCTTTATTAATCTTGATACA AGACTTTGAAATTCTGGTTG
Product: glutaredoxin
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MQPHSLKLFPESDLINSIKEYSLSNNLYGYVSGVVGNLRTVCIQCPGNQEINKFEGNLEIVSLNGHFNKGDVHLHLSFAD EGCNVFGGHLEEGCIVKKGTDILLLSFEQKIINISNHDLITNESRVKAYILKDCPWSKRAIRLLNSLSIPHKVTLIDNDE SFQKIMAQSSHNTFPQIFLDNKFFGGYDELSEQAKLDNLISFK
Sequences:
>Translated_203_residues MQPHSLKLFPESDLINSIKEYSLSNNLYGYVSGVVGNLRTVCIQCPGNQEINKFEGNLEIVSLNGHFNKGDVHLHLSFAD EGCNVFGGHLEEGCIVKKGTDILLLSFEQKIINISNHDLITNESRVKAYILKDCPWSKRAIRLLNSLSIPHKVTLIDNDE SFQKIMAQSSHNTFPQIFLDNKFFGGYDELSEQAKLDNLISFK >Mature_203_residues MQPHSLKLFPESDLINSIKEYSLSNNLYGYVSGVVGNLRTVCIQCPGNQEINKFEGNLEIVSLNGHFNKGDVHLHLSFAD EGCNVFGGHLEEGCIVKKGTDILLLSFEQKIINISNHDLITNESRVKAYILKDCPWSKRAIRLLNSLSIPHKVTLIDNDE SFQKIMAQSSHNTFPQIFLDNKFFGGYDELSEQAKLDNLISFK
Specific function: Unknown
COG id: COG1661
COG function: function code R; Predicted DNA-binding protein with PD1-like DNA-binding motif
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22873; Mature: 22873
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPHSLKLFPESDLINSIKEYSLSNNLYGYVSGVVGNLRTVCIQCPGNQEINKFEGNLEI CCCCCEEECCCHHHHHHHHHHHCCCCCCEEHHHHHCCEEEEEEECCCCCCCEEECCCEEE VSLNGHFNKGDVHLHLSFADEGCNVFGGHLEEGCIVKKGTDILLLSFEQKIINISNHDLI EEECCCCCCCEEEEEEEECCCCCCEECCCCCCCEEEECCCCEEEEEECCEEEECCCCCEE TNESRVKAYILKDCPWSKRAIRLLNSLSIPHKVTLIDNDESFQKIMAQSSHNTFPQIFLD CCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCEEEEC NKFFGGYDELSEQAKLDNLISFK CCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQPHSLKLFPESDLINSIKEYSLSNNLYGYVSGVVGNLRTVCIQCPGNQEINKFEGNLEI CCCCCEEECCCHHHHHHHHHHHCCCCCCEEHHHHHCCEEEEEEECCCCCCCEEECCCEEE VSLNGHFNKGDVHLHLSFADEGCNVFGGHLEEGCIVKKGTDILLLSFEQKIINISNHDLI EEECCCCCCCEEEEEEEECCCCCCEECCCCCCCEEEECCCCEEEEEECCEEEECCCCCEE TNESRVKAYILKDCPWSKRAIRLLNSLSIPHKVTLIDNDESFQKIMAQSSHNTFPQIFLD CCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCEEEEC NKFFGGYDELSEQAKLDNLISFK CCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA