Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

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The map label for this gene is 123968390

Identifier: 123968390

GI number: 123968390

Start: 742244

End: 743410

Strand: Reverse

Name: 123968390

Synonym: A9601_08571

Alternate gene names: NA

Gene position: 743410-742244 (Counterclockwise)

Preceding gene: 123968391

Following gene: 123968389

Centisome position: 44.52

GC content: 26.74

Gene sequence:

>1167_bases
ATGATATTAATAAATATCTTCTTAGTTCTTTTAATTTTTTTAATTATTTCAGATTTATATATTAAAAACTCACCCAAATC
AAAGTTAAATCTGGTACCTATAAATTACAAAATCAAAAAAAAGGATGGTTTAAACGAATTAATTATTGATTTAAAAATAA
CTAATAAAAGTAAAACTAAAGAGACGATGGTTTCTAATATAAATTTTGAGTTAGATTGTTTTAAAAGTAAAGGTAACGAA
TATTGCCAAAATTTTAATTATCAACAAGATATTTACATATATGAAAATAATAAAATTAAGAATTTAAATAATTACTGGCC
AACAACAATTATCAAGTCAAATTCAGAATTATTTGTAAGAATCATATATAAATTTAGCAATGATAACTTTAGAAAAAAAA
TAAAATATCTATGGTTAAAAATATATTGGGAGAACTATGGACATTTTGGTATTTCAAATAATAAGGATTGTTTCTTAATT
AATTTAGATGGTCAAAAACAAAGGCCGAAAGAGGTTTTTGAAATTCCAATAAATAATAAATATAAAGCACTTGCTATTAA
AACTGATTTACTTGGTTGCTTTGATAACCCAGTAAATACTGTGATTAAATACTGCAAAGGAATTGTAGAAAAAAATGATA
TTTTAACTATCGGTGAGAGTCCGCTAGCGATTATGCAAAATAGATATATTTCCCCTCAAAATTTAGAATATAGTTTATTT
TCGAAAGCTTTATGTTATTTTTTTCACCCTACAAGCAGTCTCGCAACAGCTTGCGGGATGCAATTATTAATAAATAAAAT
CGGAGTCACAAGAATAACCTTTGCACTATTTGTTGGATATCTCTTCAAATTAGTTGGGATTAAAGGTATGTTTTATAGGT
TAACTGGTTCAGAATCATCCCTCATTGATGATATAAGCGGCACAGTTACACCTTACGACAAGAGTATAGTTATGGGTCCT
CTCAATGCGGATTTATTTTGTAAGGAGGTCTCGAACTATCTAAAGATAGATGTTGCAGTTGTCGATGTTAATGATCTTGG
AGGTGTGAAAGTCTTAGCAAGTTCAAATAAAAAAGTAAATAAAATACTTAAAAAAAACTTATTATCTAATCCAGCTGGCA
ATGGAGATGAAAAAACCCCTATAGTATTAATAAGAGAAAAAAAGTAA

Upstream 100 bases:

>100_bases
ATTGATATAGAAGAAACGACATTTTCTGTAGAAAGTTTTAATGAATACAACAGTATCATTTCTGAAAAAAAAAATAAAAA
CAAAAATTAATTAAAAAAAA

Downstream 100 bases:

>100_bases
ATGAAAAAAGATACCTCTTATTCTTTTCAATCTAAAAAAGGAATGGAAGTAACTTTTGAAGAACTCCATATACGGCACAT
TAATCTTTTAATAGATATTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MILINIFLVLLIFLIISDLYIKNSPKSKLNLVPINYKIKKKDGLNELIIDLKITNKSKTKETMVSNINFELDCFKSKGNE
YCQNFNYQQDIYIYENNKIKNLNNYWPTTIIKSNSELFVRIIYKFSNDNFRKKIKYLWLKIYWENYGHFGISNNKDCFLI
NLDGQKQRPKEVFEIPINNKYKALAIKTDLLGCFDNPVNTVIKYCKGIVEKNDILTIGESPLAIMQNRYISPQNLEYSLF
SKALCYFFHPTSSLATACGMQLLINKIGVTRITFALFVGYLFKLVGIKGMFYRLTGSESSLIDDISGTVTPYDKSIVMGP
LNADLFCKEVSNYLKIDVAVVDVNDLGGVKVLASSNKKVNKILKKNLLSNPAGNGDEKTPIVLIREKK

Sequences:

>Translated_388_residues
MILINIFLVLLIFLIISDLYIKNSPKSKLNLVPINYKIKKKDGLNELIIDLKITNKSKTKETMVSNINFELDCFKSKGNE
YCQNFNYQQDIYIYENNKIKNLNNYWPTTIIKSNSELFVRIIYKFSNDNFRKKIKYLWLKIYWENYGHFGISNNKDCFLI
NLDGQKQRPKEVFEIPINNKYKALAIKTDLLGCFDNPVNTVIKYCKGIVEKNDILTIGESPLAIMQNRYISPQNLEYSLF
SKALCYFFHPTSSLATACGMQLLINKIGVTRITFALFVGYLFKLVGIKGMFYRLTGSESSLIDDISGTVTPYDKSIVMGP
LNADLFCKEVSNYLKIDVAVVDVNDLGGVKVLASSNKKVNKILKKNLLSNPAGNGDEKTPIVLIREKK
>Mature_388_residues
MILINIFLVLLIFLIISDLYIKNSPKSKLNLVPINYKIKKKDGLNELIIDLKITNKSKTKETMVSNINFELDCFKSKGNE
YCQNFNYQQDIYIYENNKIKNLNNYWPTTIIKSNSELFVRIIYKFSNDNFRKKIKYLWLKIYWENYGHFGISNNKDCFLI
NLDGQKQRPKEVFEIPINNKYKALAIKTDLLGCFDNPVNTVIKYCKGIVEKNDILTIGESPLAIMQNRYISPQNLEYSLF
SKALCYFFHPTSSLATACGMQLLINKIGVTRITFALFVGYLFKLVGIKGMFYRLTGSESSLIDDISGTVTPYDKSIVMGP
LNADLFCKEVSNYLKIDVAVVDVNDLGGVKVLASSNKKVNKILKKNLLSNPAGNGDEKTPIVLIREKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44394; Mature: 44394

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILINIFLVLLIFLIISDLYIKNSPKSKLNLVPINYKIKKKDGLNELIIDLKITNKSKTK
CCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCCEEEEEEEECCCCCHH
ETMVSNINFELDCFKSKGNEYCQNFNYQQDIYIYENNKIKNLNNYWPTTIIKSNSELFVR
HHHHHCCCEEEEEECCCCHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCEEEE
IIYKFSNDNFRKKIKYLWLKIYWENYGHFGISNNKDCFLINLDGQKQRPKEVFEIPINNK
EEEEECCCCHHHHHEEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCHHEECCCCCC
YKALAIKTDLLGCFDNPVNTVIKYCKGIVEKNDILTIGESPLAIMQNRYISPQNLEYSLF
EEEEEEEEHHHHHCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHCCCCCCCCCCHHHH
SKALCYFFHPTSSLATACGMQLLINKIGVTRITFALFVGYLFKLVGIKGMFYRLTGSESS
HHHHHEEECCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCH
LIDDISGTVTPYDKSIVMGPLNADLFCKEVSNYLKIDVAVVDVNDLGGVKVLASSNKKVN
HHHHCCCCCCCCCCEEEEECCCCHHHHHHHCCEEEEEEEEEEECCCCCEEEEECCCHHHH
KILKKNLLSNPAGNGDEKTPIVLIREKK
HHHHHHHHCCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MILINIFLVLLIFLIISDLYIKNSPKSKLNLVPINYKIKKKDGLNELIIDLKITNKSKTK
CCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCCEEEEEEEECCCCCHH
ETMVSNINFELDCFKSKGNEYCQNFNYQQDIYIYENNKIKNLNNYWPTTIIKSNSELFVR
HHHHHCCCEEEEEECCCCHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCEEEE
IIYKFSNDNFRKKIKYLWLKIYWENYGHFGISNNKDCFLINLDGQKQRPKEVFEIPINNK
EEEEECCCCHHHHHEEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCHHEECCCCCC
YKALAIKTDLLGCFDNPVNTVIKYCKGIVEKNDILTIGESPLAIMQNRYISPQNLEYSLF
EEEEEEEEHHHHHCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHCCCCCCCCCCHHHH
SKALCYFFHPTSSLATACGMQLLINKIGVTRITFALFVGYLFKLVGIKGMFYRLTGSESS
HHHHHEEECCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCH
LIDDISGTVTPYDKSIVMGPLNADLFCKEVSNYLKIDVAVVDVNDLGGVKVLASSNKKVN
HHHHCCCCCCCCCCEEEEECCCCHHHHHHHCCEEEEEEEEEEECCCCCEEEEECCCHHHH
KILKKNLLSNPAGNGDEKTPIVLIREKK
HHHHHHHHCCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA