| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968390
Identifier: 123968390
GI number: 123968390
Start: 742244
End: 743410
Strand: Reverse
Name: 123968390
Synonym: A9601_08571
Alternate gene names: NA
Gene position: 743410-742244 (Counterclockwise)
Preceding gene: 123968391
Following gene: 123968389
Centisome position: 44.52
GC content: 26.74
Gene sequence:
>1167_bases ATGATATTAATAAATATCTTCTTAGTTCTTTTAATTTTTTTAATTATTTCAGATTTATATATTAAAAACTCACCCAAATC AAAGTTAAATCTGGTACCTATAAATTACAAAATCAAAAAAAAGGATGGTTTAAACGAATTAATTATTGATTTAAAAATAA CTAATAAAAGTAAAACTAAAGAGACGATGGTTTCTAATATAAATTTTGAGTTAGATTGTTTTAAAAGTAAAGGTAACGAA TATTGCCAAAATTTTAATTATCAACAAGATATTTACATATATGAAAATAATAAAATTAAGAATTTAAATAATTACTGGCC AACAACAATTATCAAGTCAAATTCAGAATTATTTGTAAGAATCATATATAAATTTAGCAATGATAACTTTAGAAAAAAAA TAAAATATCTATGGTTAAAAATATATTGGGAGAACTATGGACATTTTGGTATTTCAAATAATAAGGATTGTTTCTTAATT AATTTAGATGGTCAAAAACAAAGGCCGAAAGAGGTTTTTGAAATTCCAATAAATAATAAATATAAAGCACTTGCTATTAA AACTGATTTACTTGGTTGCTTTGATAACCCAGTAAATACTGTGATTAAATACTGCAAAGGAATTGTAGAAAAAAATGATA TTTTAACTATCGGTGAGAGTCCGCTAGCGATTATGCAAAATAGATATATTTCCCCTCAAAATTTAGAATATAGTTTATTT TCGAAAGCTTTATGTTATTTTTTTCACCCTACAAGCAGTCTCGCAACAGCTTGCGGGATGCAATTATTAATAAATAAAAT CGGAGTCACAAGAATAACCTTTGCACTATTTGTTGGATATCTCTTCAAATTAGTTGGGATTAAAGGTATGTTTTATAGGT TAACTGGTTCAGAATCATCCCTCATTGATGATATAAGCGGCACAGTTACACCTTACGACAAGAGTATAGTTATGGGTCCT CTCAATGCGGATTTATTTTGTAAGGAGGTCTCGAACTATCTAAAGATAGATGTTGCAGTTGTCGATGTTAATGATCTTGG AGGTGTGAAAGTCTTAGCAAGTTCAAATAAAAAAGTAAATAAAATACTTAAAAAAAACTTATTATCTAATCCAGCTGGCA ATGGAGATGAAAAAACCCCTATAGTATTAATAAGAGAAAAAAAGTAA
Upstream 100 bases:
>100_bases ATTGATATAGAAGAAACGACATTTTCTGTAGAAAGTTTTAATGAATACAACAGTATCATTTCTGAAAAAAAAAATAAAAA CAAAAATTAATTAAAAAAAA
Downstream 100 bases:
>100_bases ATGAAAAAAGATACCTCTTATTCTTTTCAATCTAAAAAAGGAATGGAAGTAACTTTTGAAGAACTCCATATACGGCACAT TAATCTTTTAATAGATATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MILINIFLVLLIFLIISDLYIKNSPKSKLNLVPINYKIKKKDGLNELIIDLKITNKSKTKETMVSNINFELDCFKSKGNE YCQNFNYQQDIYIYENNKIKNLNNYWPTTIIKSNSELFVRIIYKFSNDNFRKKIKYLWLKIYWENYGHFGISNNKDCFLI NLDGQKQRPKEVFEIPINNKYKALAIKTDLLGCFDNPVNTVIKYCKGIVEKNDILTIGESPLAIMQNRYISPQNLEYSLF SKALCYFFHPTSSLATACGMQLLINKIGVTRITFALFVGYLFKLVGIKGMFYRLTGSESSLIDDISGTVTPYDKSIVMGP LNADLFCKEVSNYLKIDVAVVDVNDLGGVKVLASSNKKVNKILKKNLLSNPAGNGDEKTPIVLIREKK
Sequences:
>Translated_388_residues MILINIFLVLLIFLIISDLYIKNSPKSKLNLVPINYKIKKKDGLNELIIDLKITNKSKTKETMVSNINFELDCFKSKGNE YCQNFNYQQDIYIYENNKIKNLNNYWPTTIIKSNSELFVRIIYKFSNDNFRKKIKYLWLKIYWENYGHFGISNNKDCFLI NLDGQKQRPKEVFEIPINNKYKALAIKTDLLGCFDNPVNTVIKYCKGIVEKNDILTIGESPLAIMQNRYISPQNLEYSLF SKALCYFFHPTSSLATACGMQLLINKIGVTRITFALFVGYLFKLVGIKGMFYRLTGSESSLIDDISGTVTPYDKSIVMGP LNADLFCKEVSNYLKIDVAVVDVNDLGGVKVLASSNKKVNKILKKNLLSNPAGNGDEKTPIVLIREKK >Mature_388_residues MILINIFLVLLIFLIISDLYIKNSPKSKLNLVPINYKIKKKDGLNELIIDLKITNKSKTKETMVSNINFELDCFKSKGNE YCQNFNYQQDIYIYENNKIKNLNNYWPTTIIKSNSELFVRIIYKFSNDNFRKKIKYLWLKIYWENYGHFGISNNKDCFLI NLDGQKQRPKEVFEIPINNKYKALAIKTDLLGCFDNPVNTVIKYCKGIVEKNDILTIGESPLAIMQNRYISPQNLEYSLF SKALCYFFHPTSSLATACGMQLLINKIGVTRITFALFVGYLFKLVGIKGMFYRLTGSESSLIDDISGTVTPYDKSIVMGP LNADLFCKEVSNYLKIDVAVVDVNDLGGVKVLASSNKKVNKILKKNLLSNPAGNGDEKTPIVLIREKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44394; Mature: 44394
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILINIFLVLLIFLIISDLYIKNSPKSKLNLVPINYKIKKKDGLNELIIDLKITNKSKTK CCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCCEEEEEEEECCCCCHH ETMVSNINFELDCFKSKGNEYCQNFNYQQDIYIYENNKIKNLNNYWPTTIIKSNSELFVR HHHHHCCCEEEEEECCCCHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCEEEE IIYKFSNDNFRKKIKYLWLKIYWENYGHFGISNNKDCFLINLDGQKQRPKEVFEIPINNK EEEEECCCCHHHHHEEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCHHEECCCCCC YKALAIKTDLLGCFDNPVNTVIKYCKGIVEKNDILTIGESPLAIMQNRYISPQNLEYSLF EEEEEEEEHHHHHCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHCCCCCCCCCCHHHH SKALCYFFHPTSSLATACGMQLLINKIGVTRITFALFVGYLFKLVGIKGMFYRLTGSESS HHHHHEEECCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCH LIDDISGTVTPYDKSIVMGPLNADLFCKEVSNYLKIDVAVVDVNDLGGVKVLASSNKKVN HHHHCCCCCCCCCCEEEEECCCCHHHHHHHCCEEEEEEEEEEECCCCCEEEEECCCHHHH KILKKNLLSNPAGNGDEKTPIVLIREKK HHHHHHHHCCCCCCCCCCCCEEEEEECC >Mature Secondary Structure MILINIFLVLLIFLIISDLYIKNSPKSKLNLVPINYKIKKKDGLNELIIDLKITNKSKTK CCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCCEEEEEEEECCCCCHH ETMVSNINFELDCFKSKGNEYCQNFNYQQDIYIYENNKIKNLNNYWPTTIIKSNSELFVR HHHHHCCCEEEEEECCCCHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCEEEE IIYKFSNDNFRKKIKYLWLKIYWENYGHFGISNNKDCFLINLDGQKQRPKEVFEIPINNK EEEEECCCCHHHHHEEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCHHEECCCCCC YKALAIKTDLLGCFDNPVNTVIKYCKGIVEKNDILTIGESPLAIMQNRYISPQNLEYSLF EEEEEEEEHHHHHCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHCCCCCCCCCCHHHH SKALCYFFHPTSSLATACGMQLLINKIGVTRITFALFVGYLFKLVGIKGMFYRLTGSESS HHHHHEEECCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCH LIDDISGTVTPYDKSIVMGPLNADLFCKEVSNYLKIDVAVVDVNDLGGVKVLASSNKKVN HHHHCCCCCCCCCCEEEEECCCCHHHHHHHCCEEEEEEEEEEECCCCCEEEEECCCHHHH KILKKNLLSNPAGNGDEKTPIVLIREKK HHHHHHHHCCCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA