| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968387
Identifier: 123968387
GI number: 123968387
Start: 740167
End: 740703
Strand: Reverse
Name: 123968387
Synonym: A9601_08541
Alternate gene names: NA
Gene position: 740703-740167 (Counterclockwise)
Preceding gene: 123968388
Following gene: 123968386
Centisome position: 44.36
GC content: 30.54
Gene sequence:
>537_bases ATGAAAGAAGCCAATTCAAATGATAATTATGATGCACAGACTCTTTTATTAAATGACTCAAATGGAAACGAGCTATTCTG TTATCTTGAACAATTAGTAAGTGTTGAAGGCCAAGAATATGCTTTATTAACGCCAGTTGATACACCAGTAAGTCTTTTTA AGATAAATGAAAAAGATGAACCTGAACTAATTGAGAAAATAGATAAAAATGAACAAATACTAAAAAATGCTGAAGCAGTC CTTCAAGAACATGATTTAAGACTTATCAGATCAGCGGTTACATTAACAGTTTCAGGAGAACTTGAAGAACCAATTTACGA TGAATTAGAAGAAGATTACGTCGATGATGATAGTGAGAGTTATGAATTGCTAGTTAACTTTAATCTTTTTGACCAAGAAT ATGGCTTATATATACCACTAGATCCTTTTTTTATTGTTGGTAAATTAAAAGACAAAGGTGCCTTATTAGTTGAAGATGAT GAGTTCGATAAAATTCAACCTTTGATTGAAACTGAGCTTGAAAAAAGTAGTTCTTAA
Upstream 100 bases:
>100_bases TAATACTTGAACAATGGATCGAAGAAGGTCCTGAATTAGAAGAAATAGCTGGTAAACGTCAGATAAAATATTAGTATTAA AAAGGATAGATAATTTTTAA
Downstream 100 bases:
>100_bases AATAAATGAGATCTATCCTAAATATCAATTGGGATTCAAACTTACCAATATATAATATTTCTCAATCTGAGTTGCAAAAA AAAGGAATTAATTCTTTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MKEANSNDNYDAQTLLLNDSNGNELFCYLEQLVSVEGQEYALLTPVDTPVSLFKINEKDEPELIEKIDKNEQILKNAEAV LQEHDLRLIRSAVTLTVSGELEEPIYDELEEDYVDDDSESYELLVNFNLFDQEYGLYIPLDPFFIVGKLKDKGALLVEDD EFDKIQPLIETELEKSSS
Sequences:
>Translated_178_residues MKEANSNDNYDAQTLLLNDSNGNELFCYLEQLVSVEGQEYALLTPVDTPVSLFKINEKDEPELIEKIDKNEQILKNAEAV LQEHDLRLIRSAVTLTVSGELEEPIYDELEEDYVDDDSESYELLVNFNLFDQEYGLYIPLDPFFIVGKLKDKGALLVEDD EFDKIQPLIETELEKSSS >Mature_178_residues MKEANSNDNYDAQTLLLNDSNGNELFCYLEQLVSVEGQEYALLTPVDTPVSLFKINEKDEPELIEKIDKNEQILKNAEAV LQEHDLRLIRSAVTLTVSGELEEPIYDELEEDYVDDDSESYELLVNFNLFDQEYGLYIPLDPFFIVGKLKDKGALLVEDD EFDKIQPLIETELEKSSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20390; Mature: 20390
Theoretical pI: Translated: 3.70; Mature: 3.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEANSNDNYDAQTLLLNDSNGNELFCYLEQLVSVEGQEYALLTPVDTPVSLFKINEKDE CCCCCCCCCCCEEEEEEECCCCCEEHHHHHHHHCCCCCCEEEEECCCCCEEEEEECCCCC PELIEKIDKNEQILKNAEAVLQEHDLRLIRSAVTLTVSGELEEPIYDELEEDYVDDDSES HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHCCCCCCC YELLVNFNLFDQEYGLYIPLDPFFIVGKLKDKGALLVEDDEFDKIQPLIETELEKSSS EEEEEEEEEECCCCCEEEECCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MKEANSNDNYDAQTLLLNDSNGNELFCYLEQLVSVEGQEYALLTPVDTPVSLFKINEKDE CCCCCCCCCCCEEEEEEECCCCCEEHHHHHHHHCCCCCCEEEEECCCCCEEEEEECCCCC PELIEKIDKNEQILKNAEAVLQEHDLRLIRSAVTLTVSGELEEPIYDELEEDYVDDDSES HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHCCCCCCC YELLVNFNLFDQEYGLYIPLDPFFIVGKLKDKGALLVEDDEFDKIQPLIETELEKSSS EEEEEEEEEECCCCCEEEECCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA