| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968345
Identifier: 123968345
GI number: 123968345
Start: 697773
End: 698945
Strand: Direct
Name: 123968345
Synonym: A9601_08101
Alternate gene names: NA
Gene position: 697773-698945 (Clockwise)
Preceding gene: 123968344
Following gene: 123968346
Centisome position: 41.79
GC content: 34.61
Gene sequence:
>1173_bases ATGAGTTTTTCTTTTTTTAAATTTAGAAAAATACCATTAGCTTGGTTGTTATTAACTAGGCAACCATTAAGGTTAGCAGT TGCAATAGCTGGAATCAGTTTTGCAGGGATTTTGATGTTTATGCAATTAGGTTTTAGAGATGGTTTATTTGACACGAGCG TAACTATTCATAAACTTCTAGATGCAGATCTTGTTTTGATAAGTCCCAGATCAAAAAGTTCTATAAGCATGAGTGGATTC CCAAAAAGAAGATTAATTCAAACTCTCGCAGTAGAGGATGTTGAAAAAACTGCTCCTGTTAATCTGAATTATTTACTTTG GAGAAATCCCGAAAATCTTAAAACTAGATCTATACTTGCATTAGGTTTTAATCCCTCCGATTCACTTCTTTTAGATGAGG GATTCTCAAGTAAAGCTTATAAATTAAGAAATCCATCAAGAGTTCTTTTTGACAAATTATCTAGACCTGAATTTGGACCG ATTGAAGAATGGTTCTTATCTGAAAAAAAAGTTGAGACTGAGGTTGCTGGAAAAAGAGTAATTGTTGAGGGCCTTGTGGA GTTGGGACCATCTTTCGGTGCAGATGGTAATTTGATAACTAGTCGAGAAACCTTCTTAAGACTTTTTCCTGCTAATCCTC CTGGCAGTATAGAAATTGGCTTGGTAAAGCTAAAAAAAGGATCTGATCCTGAATTGATTTCAATGATATTAAATAACTCA CTCCCAAATGATGTTAGGGTTCTTACAAAAAATCAATTTATAGAATTTGAGAAGAATTACTGGAAAAATAGTACTGCAAT AGGTTTTATATTTAGTTTGGGAGCATTGATGGGTTTCGTTGTAGGGTGTGTGGTTGTTTATCAAATTCTTTATAGTGACG TTACAGATCACCTCCCAGAGTATGCCACCTTATTGGCAATGGGATATAGACTTAAGTCCCTTTTCTTTGTTGTAGCTAGA GAGGGGTTTTTATTGGCATTGTTTGGTTATTTACCTGCTTATTTTTCTGGCCAGATACTTTACTCAGTTATAAGAAGTTC AACTAAGCTGCCAATAATAATGGATGCAGATAAAACTGTTTTAATTTTCGTATTAGTTTTAGTTATGTGTATGGGGTCCG CAGCTGTAGCGATGCGCAAATTAGTTGATGCTGATCCTGCCGAAATTTTTTAA
Upstream 100 bases:
>100_bases ATTCACGAATTATCGAGGTACTAGTAAAACTAGATCAAGATTCTATAGATATCGTTCAAAACTATGCAGGAATGAAAGTG ATTGCAAAATTTATTCCCTA
Downstream 100 bases:
>100_bases TAATTGAAGATAAATGGTTAAAGTTAATAAATTTAAAAATAATGTTAAAAACCTTAAAACCGTCTCAATAAATAATTTGA GTCACTTTTATGGAAAAAAT
Product: ABC-transporter, membrane spanning component
Products: NA
Alternate protein names: ABC-Transporter Membrane Spanning Component; ABC Transporter Permease; ABC Transporter Permease Protein; Efflux ABC Transporter Permease Protein; Glycolipid ABC Exporter Family Permease Protein; Glycolipid ABC Exporter Inner Membrane Subunit; DevC-Like ABC Transporter Permease Protein; Membrane Permease Or ABC Transporter Component; DevC-Like ABC Transporter Permease Component; Exporter Subunit DevC- ABC Transporter Family Protein; ABC-Transporter DevC-Like-Protein; ABC Transporter Transmembrane Protein; Permease Protein DevC-Like Protein; ABC Efflux Pump Inner Membrane Subunit; DevC-Like ABC Transporter Permease; ABC Transporter Permease Component; ABC-Transporter DevC Family Protein; ABC Transporter Membrane Spanning Subunit DevC-Like
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MSFSFFKFRKIPLAWLLLTRQPLRLAVAIAGISFAGILMFMQLGFRDGLFDTSVTIHKLLDADLVLISPRSKSSISMSGF PKRRLIQTLAVEDVEKTAPVNLNYLLWRNPENLKTRSILALGFNPSDSLLLDEGFSSKAYKLRNPSRVLFDKLSRPEFGP IEEWFLSEKKVETEVAGKRVIVEGLVELGPSFGADGNLITSRETFLRLFPANPPGSIEIGLVKLKKGSDPELISMILNNS LPNDVRVLTKNQFIEFEKNYWKNSTAIGFIFSLGALMGFVVGCVVVYQILYSDVTDHLPEYATLLAMGYRLKSLFFVVAR EGFLLALFGYLPAYFSGQILYSVIRSSTKLPIIMDADKTVLIFVLVLVMCMGSAAVAMRKLVDADPAEIF
Sequences:
>Translated_390_residues MSFSFFKFRKIPLAWLLLTRQPLRLAVAIAGISFAGILMFMQLGFRDGLFDTSVTIHKLLDADLVLISPRSKSSISMSGF PKRRLIQTLAVEDVEKTAPVNLNYLLWRNPENLKTRSILALGFNPSDSLLLDEGFSSKAYKLRNPSRVLFDKLSRPEFGP IEEWFLSEKKVETEVAGKRVIVEGLVELGPSFGADGNLITSRETFLRLFPANPPGSIEIGLVKLKKGSDPELISMILNNS LPNDVRVLTKNQFIEFEKNYWKNSTAIGFIFSLGALMGFVVGCVVVYQILYSDVTDHLPEYATLLAMGYRLKSLFFVVAR EGFLLALFGYLPAYFSGQILYSVIRSSTKLPIIMDADKTVLIFVLVLVMCMGSAAVAMRKLVDADPAEIF >Mature_389_residues SFSFFKFRKIPLAWLLLTRQPLRLAVAIAGISFAGILMFMQLGFRDGLFDTSVTIHKLLDADLVLISPRSKSSISMSGFP KRRLIQTLAVEDVEKTAPVNLNYLLWRNPENLKTRSILALGFNPSDSLLLDEGFSSKAYKLRNPSRVLFDKLSRPEFGPI EEWFLSEKKVETEVAGKRVIVEGLVELGPSFGADGNLITSRETFLRLFPANPPGSIEIGLVKLKKGSDPELISMILNNSL PNDVRVLTKNQFIEFEKNYWKNSTAIGFIFSLGALMGFVVGCVVVYQILYSDVTDHLPEYATLLAMGYRLKSLFFVVARE GFLLALFGYLPAYFSGQILYSVIRSSTKLPIIMDADKTVLIFVLVLVMCMGSAAVAMRKLVDADPAEIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43537; Mature: 43406
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFSFFKFRKIPLAWLLLTRQPLRLAVAIAGISFAGILMFMQLGFRDGLFDTSVTIHKLL CCCCCHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH DADLVLISPRSKSSISMSGFPKRRLIQTLAVEDVEKTAPVNLNYLLWRNPENLKTRSILA CCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEE LGFNPSDSLLLDEGFSSKAYKLRNPSRVLFDKLSRPEFGPIEEWFLSEKKVETEVAGKRV EECCCCCCEEEECCCCCCCEECCCCHHHHHHHCCCCCCCCHHHHHHCHHHHHHHHHCHHH IVEGLVELGPSFGADGNLITSRETFLRLFPANPPGSIEIGLVKLKKGSDPELISMILNNS HHHHHHHCCCCCCCCCCEEECHHHEEEEECCCCCCCEEEEEEEECCCCCHHHHHHHHHCC LPNDVRVLTKNQFIEFEKNYWKNSTAIGFIFSLGALMGFVVGCVVVYQILYSDVTDHLPE CCCCCEEEEHHHHEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YATLLAMGYRLKSLFFVVAREGFLLALFGYLPAYFSGQILYSVIRSSTKLPIIMDADKTV HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHH LIFVLVLVMCMGSAAVAMRKLVDADPAEIF HHHHHHHHHHHCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SFSFFKFRKIPLAWLLLTRQPLRLAVAIAGISFAGILMFMQLGFRDGLFDTSVTIHKLL CCCCHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH DADLVLISPRSKSSISMSGFPKRRLIQTLAVEDVEKTAPVNLNYLLWRNPENLKTRSILA CCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEE LGFNPSDSLLLDEGFSSKAYKLRNPSRVLFDKLSRPEFGPIEEWFLSEKKVETEVAGKRV EECCCCCCEEEECCCCCCCEECCCCHHHHHHHCCCCCCCCHHHHHHCHHHHHHHHHCHHH IVEGLVELGPSFGADGNLITSRETFLRLFPANPPGSIEIGLVKLKKGSDPELISMILNNS HHHHHHHCCCCCCCCCCEEECHHHEEEEECCCCCCCEEEEEEEECCCCCHHHHHHHHHCC LPNDVRVLTKNQFIEFEKNYWKNSTAIGFIFSLGALMGFVVGCVVVYQILYSDVTDHLPE CCCCCEEEEHHHHEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YATLLAMGYRLKSLFFVVAREGFLLALFGYLPAYFSGQILYSVIRSSTKLPIIMDADKTV HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHH LIFVLVLVMCMGSAAVAMRKLVDADPAEIF HHHHHHHHHHHCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA