Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

Click here to switch to the map view.

The map label for this gene is 123968327

Identifier: 123968327

GI number: 123968327

Start: 686909

End: 687103

Strand: Reverse

Name: 123968327

Synonym: A9601_07921

Alternate gene names: NA

Gene position: 687103-686909 (Counterclockwise)

Preceding gene: 123968329

Following gene: 123968325

Centisome position: 41.15

GC content: 29.23

Gene sequence:

>195_bases
ATGTCCTACGAAGCAGGCAGTAAAGAATGTAGACATTTAATTGAAGCTAAAGAAAGCCTTCTTTCAACATTAGATGCGTT
AAGTAATATACATTCGACCGATCTAATACAAATCCAAATTAAAGAAATTTACAATAAATTAGAACAGATGCACGACAATA
GAAAAAAAATAGAATCAGCTACAAATTATCTTTAA

Upstream 100 bases:

>100_bases
TTGAAAATTACAATAATAAGCGTTGATTTAATAAGAGTATCAAGCAATACGGAAGAATTTTTAATATATTTAAGATAATA
GTTTTCTTTATAATAATCCT

Downstream 100 bases:

>100_bases
TACATTTATTAAACTGAAAGATCTCAAAATTGGCTTTTTATCTTGGTTACTTTTTTTTCTGATAATAAATCCAATAAAGC
ATCAAGCTGAGCGAGTACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 64; Mature: 63

Protein sequence:

>64_residues
MSYEAGSKECRHLIEAKESLLSTLDALSNIHSTDLIQIQIKEIYNKLEQMHDNRKKIESATNYL

Sequences:

>Translated_64_residues
MSYEAGSKECRHLIEAKESLLSTLDALSNIHSTDLIQIQIKEIYNKLEQMHDNRKKIESATNYL
>Mature_63_residues
SYEAGSKECRHLIEAKESLLSTLDALSNIHSTDLIQIQIKEIYNKLEQMHDNRKKIESATNYL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7408; Mature: 7276

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYEAGSKECRHLIEAKESLLSTLDALSNIHSTDLIQIQIKEIYNKLEQMHDNRKKIESA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TNYL
HCCC
>Mature Secondary Structure 
SYEAGSKECRHLIEAKESLLSTLDALSNIHSTDLIQIQIKEIYNKLEQMHDNRKKIESA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TNYL
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA