| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
Click here to switch to the map view.
The map label for this gene is 123968322
Identifier: 123968322
GI number: 123968322
Start: 684081
End: 685400
Strand: Reverse
Name: 123968322
Synonym: A9601_07871
Alternate gene names: NA
Gene position: 685400-684081 (Counterclockwise)
Preceding gene: 123968323
Following gene: 123968321
Centisome position: 41.04
GC content: 28.11
Gene sequence:
>1320_bases ATGAAAGATATTAAATGTCCTTCATGCGGCAAAACTTTCCGGATTGATCCCAGCAGCTTTGAAGAAATACTTCTTCAGAT AAAAGACGAGGAGTTTAACAAACAAATAAAAGAAAGACTTACTCTAGCTGAAGAAGATAATAAAAAAGCTTTGGAAATTT TAAAACGAGAGTTAAAAATACAGTTAATAGAGCAAAATCGTATTAAAGAGTCCGAAATCCAAACTCTTGAATCTAAATTA AAAATAGCTGAAGAAAAGAAAACAAATGCTCTTAATGATTTAAAAAATCAAGCAACAAATAAAATTAATTCACTGAATAA TGAATTAATCAAGTTAAAGGATGAAATTAAAAATCAGTCTTTAATTTCAGAATTATCCTTAAAAAATAAAGTTAGTGAAG CTGTTAATAATTTAGAAAAAGAAAACTCATCATTAACAAATTCCATTGAAAAGATGAGGCTTGAACATTCAATTAATGAA AAATTAATTGAAGAAAAGTTTAAAAGCAAAATTAGTGAAAGGGACTTGACTATTCAGGAGTTAAGAGAAATGAAATCCAG ATTATCTACAAAGATGATAGGAGAAACATTAGAAATCCATTGCGAAACCCAATTTAATCTGAATCGTGCCTCTGCGTTTA AAAACTCATATTTCGAAAAGGATAATGATGCCACTTCTGGAAGTAAAGGGGACTATATATTTAGAGAATTTGATGAAAAT AAAACTGAAGTTGTATCAATAATGTTCGAGATGAAGAATGAAAGTTTAAATGGAACTAATAAAAGAAAAAACGAAGATTT TTTAAAAGAATTAGATAAAGATAGAAGGCAAAAATCTTGTGAATATGCAGTACTCGTTTCTCTATTAGAACCAGATAGTG AACTATATAATGCTGGCATAGTAGATGTTTCTCATAGATTCCCAAAAATGTTTGTCATAAGACCTCAATTTTTCTTACCC ATTATTTCTCTGTTAAGAAATGCATCTATGGAAACCTTAAAATACAAATCACAAATTGATTTAATGAAACGTGAGAATTT TGATATAACTAATTTTGAAAGTACTCTTGAGCAATTCAAAAATGCAGTTGGTAAAAATGTTTCTCTTGCCCAAGATAGAT TTAATGATGCAATTTCAGAAATTGATAAATCAATAACTCATTTACAAAAAACTAAGGAGGCTTTAGTTCTCTCAAAAAAA CATCTTTTATCTGCTGACAGCAAATCTCAAGATTTGACAGTAAAAAAATTAACTAGAAATAACCCAACCATGAAGAAAAA GTTTAATGATTTAAATAATTTCGAAGATGAAGTAGCCTAA
Upstream 100 bases:
>100_bases GCATAATATTGGTTCATTGTTTATTCTTAGTCAAGAATAATATTCTTTTTACATAATTCGAATATTAAATCCTTTCTAAT ATTAATTTTGTAATTAAAAA
Downstream 100 bases:
>100_bases TTAAACAAAAAATTATTGAAATTAATAATAGTTAAAATATTTTTAATTTCCGATTTATAAATATAATATTAATAATAAAT TCCATAGCTAAGGAAATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 439; Mature: 439
Protein sequence:
>439_residues MKDIKCPSCGKTFRIDPSSFEEILLQIKDEEFNKQIKERLTLAEEDNKKALEILKRELKIQLIEQNRIKESEIQTLESKL KIAEEKKTNALNDLKNQATNKINSLNNELIKLKDEIKNQSLISELSLKNKVSEAVNNLEKENSSLTNSIEKMRLEHSINE KLIEEKFKSKISERDLTIQELREMKSRLSTKMIGETLEIHCETQFNLNRASAFKNSYFEKDNDATSGSKGDYIFREFDEN KTEVVSIMFEMKNESLNGTNKRKNEDFLKELDKDRRQKSCEYAVLVSLLEPDSELYNAGIVDVSHRFPKMFVIRPQFFLP IISLLRNASMETLKYKSQIDLMKRENFDITNFESTLEQFKNAVGKNVSLAQDRFNDAISEIDKSITHLQKTKEALVLSKK HLLSADSKSQDLTVKKLTRNNPTMKKKFNDLNNFEDEVA
Sequences:
>Translated_439_residues MKDIKCPSCGKTFRIDPSSFEEILLQIKDEEFNKQIKERLTLAEEDNKKALEILKRELKIQLIEQNRIKESEIQTLESKL KIAEEKKTNALNDLKNQATNKINSLNNELIKLKDEIKNQSLISELSLKNKVSEAVNNLEKENSSLTNSIEKMRLEHSINE KLIEEKFKSKISERDLTIQELREMKSRLSTKMIGETLEIHCETQFNLNRASAFKNSYFEKDNDATSGSKGDYIFREFDEN KTEVVSIMFEMKNESLNGTNKRKNEDFLKELDKDRRQKSCEYAVLVSLLEPDSELYNAGIVDVSHRFPKMFVIRPQFFLP IISLLRNASMETLKYKSQIDLMKRENFDITNFESTLEQFKNAVGKNVSLAQDRFNDAISEIDKSITHLQKTKEALVLSKK HLLSADSKSQDLTVKKLTRNNPTMKKKFNDLNNFEDEVA >Mature_439_residues MKDIKCPSCGKTFRIDPSSFEEILLQIKDEEFNKQIKERLTLAEEDNKKALEILKRELKIQLIEQNRIKESEIQTLESKL KIAEEKKTNALNDLKNQATNKINSLNNELIKLKDEIKNQSLISELSLKNKVSEAVNNLEKENSSLTNSIEKMRLEHSINE KLIEEKFKSKISERDLTIQELREMKSRLSTKMIGETLEIHCETQFNLNRASAFKNSYFEKDNDATSGSKGDYIFREFDEN KTEVVSIMFEMKNESLNGTNKRKNEDFLKELDKDRRQKSCEYAVLVSLLEPDSELYNAGIVDVSHRFPKMFVIRPQFFLP IISLLRNASMETLKYKSQIDLMKRENFDITNFESTLEQFKNAVGKNVSLAQDRFNDAISEIDKSITHLQKTKEALVLSKK HLLSADSKSQDLTVKKLTRNNPTMKKKFNDLNNFEDEVA
Specific function: Unknown
COG id: COG4487
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019219 [H]
Pfam domain/function: PF09903 DUF2130 [H]
EC number: NA
Molecular weight: Translated: 51002; Mature: 51002
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDIKCPSCGKTFRIDPSSFEEILLQIKDEEFNKQIKERLTLAEEDNKKALEILKRELKI CCCCCCCCCCCEEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH QLIEQNRIKESEIQTLESKLKIAEEKKTNALNDLKNQATNKINSLNNELIKLKDEIKNQS HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LISELSLKNKVSEAVNNLEKENSSLTNSIEKMRLEHSINEKLIEEKFKSKISERDLTIQE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LREMKSRLSTKMIGETLEIHCETQFNLNRASAFKNSYFEKDNDATSGSKGDYIFREFDEN HHHHHHHHHHHHHCCHHEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCC KTEVVSIMFEMKNESLNGTNKRKNEDFLKELDKDRRQKSCEYAVLVSLLEPDSELYNAGI HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHCCCC VDVSHRFPKMFVIRPQFFLPIISLLRNASMETLKYKSQIDLMKRENFDITNFESTLEQFK EEHHCCCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH NAVGKNVSLAQDRFNDAISEIDKSITHLQKTKEALVLSKKHLLSADSKSQDLTVKKLTRN HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCC NPTMKKKFNDLNNFEDEVA CCHHHHHHHHHHCCHHHCC >Mature Secondary Structure MKDIKCPSCGKTFRIDPSSFEEILLQIKDEEFNKQIKERLTLAEEDNKKALEILKRELKI CCCCCCCCCCCEEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH QLIEQNRIKESEIQTLESKLKIAEEKKTNALNDLKNQATNKINSLNNELIKLKDEIKNQS HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LISELSLKNKVSEAVNNLEKENSSLTNSIEKMRLEHSINEKLIEEKFKSKISERDLTIQE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LREMKSRLSTKMIGETLEIHCETQFNLNRASAFKNSYFEKDNDATSGSKGDYIFREFDEN HHHHHHHHHHHHHCCHHEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCC KTEVVSIMFEMKNESLNGTNKRKNEDFLKELDKDRRQKSCEYAVLVSLLEPDSELYNAGI HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHCCCC VDVSHRFPKMFVIRPQFFLPIISLLRNASMETLKYKSQIDLMKRENFDITNFESTLEQFK EEHHCCCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH NAVGKNVSLAQDRFNDAISEIDKSITHLQKTKEALVLSKKHLLSADSKSQDLTVKKLTRN HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCC NPTMKKKFNDLNNFEDEVA CCHHHHHHHHHHCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7569993 [H]