| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is pstS [H]
Identifier: 123968309
GI number: 123968309
Start: 672438
End: 673409
Strand: Direct
Name: pstS [H]
Synonym: A9601_07741
Alternate gene names: 123968309
Gene position: 672438-673409 (Clockwise)
Preceding gene: 123968308
Following gene: 123968310
Centisome position: 40.27
GC content: 37.96
Gene sequence:
>972_bases GTGGGCATTTTCAAAAAAACCCTTATTTTCTCTTCTGCAATTTCATTAATACTTTCTCCATCTGCAATAGCATCAAAAAG ATTGAGCGGAGCAGGTGCTACATTTCCCTCGAAAATTTATACTAGGTGGTTTTTTGACTTAGCCAAATCTGGTGGACCAA GGGTTAACTACCAAGCAGTTGGTTCGGGCTCTGGAAGAAAAGCTTTTATAGACCAAACCGTAAACTTTGGTGCATCAGAT GATCCTATGAAAGATTCTGATATAGAGAAAGTTAGTAGAGGACTTGTTCAAATACCTATGGTTGGTGGGACTATTGCTTT TGGTTATAACTATGATTGCGATTTGAAACTTACTCAAGAACAAGCAGTACGAGTTGCAATGGGTATGGTTAAAAACTGGA AAGAATTAGGCTGTAAATCAGGAAAGTTAACTTGGACACATCGTTCTGATGGTTCAGGAACTACTAAGGCTTTCACAAAC TCTATGGAAGAATTTTCACCAACATGGACTTTAGGAACTGGTAAATCAGTTAAGTGGCCAGCAGGCGTTGGGGCAAAAGG TAATTCTGGTGTTGCAGGTGTAATTCAAAACACTCCAGGTGCAATTGGTTATGTTAACCAGTCTTATATAAAAGGTAATG TTAAAGCTGCTGCACTTCAAAATTATTCAGGGGAATTTCTAAAACCATCTGCAGAAGCAGGAGCTAAGGCTCTTAATGGT ATTACTTTAGATGAAAATCTTGCGGGTAAAAATCCTAATCCAACAGCAAAAGGAGCGTACCCTATAGCTTCATTGACATG GATACTTGCTTACGAAAAAGGTAATGGTAGAAACACTAAAGCAATCAAACAAGCCTTTAATACATTGTTAAGTGATGAGT ATCAAGATAAGGCTTCATCCCTTGGATTTATCCCCTTAAAAGGGAATATCCTTTTGAAATCAAGAGCTGCCGTTGAAAAA ATAGGTAGTTAA
Upstream 100 bases:
>100_bases ATATATCAAGAATAATTTGATATATAAATCTTTCAATTTTTAAATTTCTTTAAGGCTATCAATTAACTTTACAATTAATA AACTTATTTCTCATTACTCA
Downstream 100 bases:
>100_bases AAATTTTAATAGATGTCAAATTATCATGACTTTCATATACCTTTAAGTCCTCTTAAAGTCTTTTACAGCATTTAGTAGTA GATTTATAGAGATATTCCTT
Product: ABC transporter, substrate binding protein, phosphate
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: PBP [H]
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MGIFKKTLIFSSAISLILSPSAIASKRLSGAGATFPSKIYTRWFFDLAKSGGPRVNYQAVGSGSGRKAFIDQTVNFGASD DPMKDSDIEKVSRGLVQIPMVGGTIAFGYNYDCDLKLTQEQAVRVAMGMVKNWKELGCKSGKLTWTHRSDGSGTTKAFTN SMEEFSPTWTLGTGKSVKWPAGVGAKGNSGVAGVIQNTPGAIGYVNQSYIKGNVKAAALQNYSGEFLKPSAEAGAKALNG ITLDENLAGKNPNPTAKGAYPIASLTWILAYEKGNGRNTKAIKQAFNTLLSDEYQDKASSLGFIPLKGNILLKSRAAVEK IGS
Sequences:
>Translated_323_residues MGIFKKTLIFSSAISLILSPSAIASKRLSGAGATFPSKIYTRWFFDLAKSGGPRVNYQAVGSGSGRKAFIDQTVNFGASD DPMKDSDIEKVSRGLVQIPMVGGTIAFGYNYDCDLKLTQEQAVRVAMGMVKNWKELGCKSGKLTWTHRSDGSGTTKAFTN SMEEFSPTWTLGTGKSVKWPAGVGAKGNSGVAGVIQNTPGAIGYVNQSYIKGNVKAAALQNYSGEFLKPSAEAGAKALNG ITLDENLAGKNPNPTAKGAYPIASLTWILAYEKGNGRNTKAIKQAFNTLLSDEYQDKASSLGFIPLKGNILLKSRAAVEK IGS >Mature_322_residues GIFKKTLIFSSAISLILSPSAIASKRLSGAGATFPSKIYTRWFFDLAKSGGPRVNYQAVGSGSGRKAFIDQTVNFGASDD PMKDSDIEKVSRGLVQIPMVGGTIAFGYNYDCDLKLTQEQAVRVAMGMVKNWKELGCKSGKLTWTHRSDGSGTTKAFTNS MEEFSPTWTLGTGKSVKWPAGVGAKGNSGVAGVIQNTPGAIGYVNQSYIKGNVKAAALQNYSGEFLKPSAEAGAKALNGI TLDENLAGKNPNPTAKGAYPIASLTWILAYEKGNGRNTKAIKQAFNTLLSDEYQDKASSLGFIPLKGNILLKSRAAVEKI GS
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
Organism=Escherichia coli, GI2367271, Length=315, Percent_Identity=33.6507936507937, Blast_Score=154, Evalue=8e-39,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005673 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 34245; Mature: 34114
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIFKKTLIFSSAISLILSPSAIASKRLSGAGATFPSKIYTRWFFDLAKSGGPRVNYQAV CCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEE GSGSGRKAFIDQTVNFGASDDPMKDSDIEKVSRGLVQIPMVGGTIAFGYNYDCDLKLTQE CCCCCCEEEEHHHHCCCCCCCCCCCCHHHHHHCCEEEEEEECCEEEECCCCCCCEEECHH QAVRVAMGMVKNWKELGCKSGKLTWTHRSDGSGTTKAFTNSMEEFSPTWTLGTGKSVKWP HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCEEECCCCCEECC AGVGAKGNSGVAGVIQNTPGAIGYVNQSYIKGNVKAAALQNYSGEFLKPSAEAGAKALNG CCCCCCCCCCEEEEEECCCCCEEECCHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHCC ITLDENLAGKNPNPTAKGAYPIASLTWILAYEKGNGRNTKAIKQAFNTLLSDEYQDKASS CEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC LGFIPLKGNILLKSRAAVEKIGS CCEEEECCCEEEECHHHHHHHCC >Mature Secondary Structure GIFKKTLIFSSAISLILSPSAIASKRLSGAGATFPSKIYTRWFFDLAKSGGPRVNYQAV CCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEE GSGSGRKAFIDQTVNFGASDDPMKDSDIEKVSRGLVQIPMVGGTIAFGYNYDCDLKLTQE CCCCCCEEEEHHHHCCCCCCCCCCCCHHHHHHCCEEEEEEECCEEEECCCCCCCEEECHH QAVRVAMGMVKNWKELGCKSGKLTWTHRSDGSGTTKAFTNSMEEFSPTWTLGTGKSVKWP HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCEEECCCCCEECC AGVGAKGNSGVAGVIQNTPGAIGYVNQSYIKGNVKAAALQNYSGEFLKPSAEAGAKALNG CCCCCCCCCCEEEEEECCCCCEEECCHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHCC ITLDENLAGKNPNPTAKGAYPIASLTWILAYEKGNGRNTKAIKQAFNTLLSDEYQDKASS CEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC LGFIPLKGNILLKSRAAVEKIGS CCEEEECCCEEEECHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]