| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
Click here to switch to the map view.
The map label for this gene is ispG [H]
Identifier: 123968266
GI number: 123968266
Start: 649755
End: 650972
Strand: Direct
Name: ispG [H]
Synonym: A9601_07311
Alternate gene names: 123968266
Gene position: 649755-650972 (Clockwise)
Preceding gene: 123968265
Following gene: 123968267
Centisome position: 38.91
GC content: 36.29
Gene sequence:
>1218_bases ATGTCATTAACTCAATCTAAAGAGGTTAATAGTCTCTCCAAAAGATATTCAACTCATATTGAGAGAAGGATAACTAGAAC AGTAATGGTGGGTGATATAGCTATTGGAAGTGATTATCCAGTAAGAGTTCAATCGATGATAAATGAAGATACTATGGATG TCGAAAATGCTTACTTAGCTATCAAAAGACTTCATGATGTGGGTTGTGAAATAGTAAGGTTAACTGTCCCTTCCTTAGCT CATGCCAAAGCGGTAGGAGATATCAAGGCAAAATTACTAGAAAATAATATCAATACCCCCTTGGTGGCTGATGTTCACCA TAATGGTATGAAAATTGCAATGGAAGTTGCAAAACATGTTGATAAAGTAAGAATTAATCCTGGATTGTTTGTTTTTGAAA AATCAGACCCTACAAGAACTGAATATACAGATGAGGAATTTGAAACTATTAAGCAAACAATACTTAAAAGATTTACCCCT TTAGTTGAAGTTTTAAAGGCTGAAAACAAAGCTCTAAGGATTGGAGTTAATCATGGGTCTCTATCTGAGAGGATGCTTTT TACTTATGGAGATACGCCATTAGGAATGACAGAATCTGCGATGGAGTTCGTCAAAATTTGTGATGAGCTTGATTTTCATA ACATAATTATTTCTATGAAAGCTTCTAGGGCTCCGGTCATGATGGCAGCTTACAGAATGATTGCCGATAGGCTTGACTCA GAAGGATATAACTATCCCTTACATTTAGGAGTGACCGAAGCTGGTGATGGTGATTATGGAAGGATTAAAAGTACTGCTGG AATTGGAACGCTTTTAGCAGAGGGATTAGGAGATACCATCAGGGTTTCCTTAACAGAAGCTCCAGAAAAGGAAATACCAG TGTGCTATTCAATTTTGCAATCTTTAGGTTTAAGAAAAACAATGGTTGAATACATCAGTTGTCCTAGTTGTGGTAGAACA CTTTTCAATTTAGAAGAAGTTGTAGATAAAGTTAGGAACGCCACTTCACATTTAACCGGTCTAGATATAGCAATAATGGG ATGTATTGTTAATGGGCCAGGAGAAATGGCAGATGCTGATTATGGTTATGTTGGGAAAGGTAAAGGAACTATTGCCTTAT ATAGAAGGAAAGAAGAGATAAAAAGAGTACCTGAAGATGAGGGTGTTAATGCTTTAATCCAACTTATTAAGGATGATGGC AAGTGGATTGATCCTTAA
Upstream 100 bases:
>100_bases ATAAACCTTACCATCTAACTTTGAAAGACCTAGAGAATGTAAGTGGTAAACTATATGCCGTATAATTTAGTGAAATCCTT TTTGAATATCAAGAATTTTA
Downstream 100 bases:
>100_bases GGATTTGTCAAATTTTTGAATTATAAATAAATTCTTTTTATAATAAAAAAGTCGAATTATTTGAAGATAAGAGAATTGCT TAAAAAAAAATATATATTTC
Product: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
Products: NA
Alternate protein names: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [H]
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MSLTQSKEVNSLSKRYSTHIERRITRTVMVGDIAIGSDYPVRVQSMINEDTMDVENAYLAIKRLHDVGCEIVRLTVPSLA HAKAVGDIKAKLLENNINTPLVADVHHNGMKIAMEVAKHVDKVRINPGLFVFEKSDPTRTEYTDEEFETIKQTILKRFTP LVEVLKAENKALRIGVNHGSLSERMLFTYGDTPLGMTESAMEFVKICDELDFHNIIISMKASRAPVMMAAYRMIADRLDS EGYNYPLHLGVTEAGDGDYGRIKSTAGIGTLLAEGLGDTIRVSLTEAPEKEIPVCYSILQSLGLRKTMVEYISCPSCGRT LFNLEEVVDKVRNATSHLTGLDIAIMGCIVNGPGEMADADYGYVGKGKGTIALYRRKEEIKRVPEDEGVNALIQLIKDDG KWIDP
Sequences:
>Translated_405_residues MSLTQSKEVNSLSKRYSTHIERRITRTVMVGDIAIGSDYPVRVQSMINEDTMDVENAYLAIKRLHDVGCEIVRLTVPSLA HAKAVGDIKAKLLENNINTPLVADVHHNGMKIAMEVAKHVDKVRINPGLFVFEKSDPTRTEYTDEEFETIKQTILKRFTP LVEVLKAENKALRIGVNHGSLSERMLFTYGDTPLGMTESAMEFVKICDELDFHNIIISMKASRAPVMMAAYRMIADRLDS EGYNYPLHLGVTEAGDGDYGRIKSTAGIGTLLAEGLGDTIRVSLTEAPEKEIPVCYSILQSLGLRKTMVEYISCPSCGRT LFNLEEVVDKVRNATSHLTGLDIAIMGCIVNGPGEMADADYGYVGKGKGTIALYRRKEEIKRVPEDEGVNALIQLIKDDG KWIDP >Mature_404_residues SLTQSKEVNSLSKRYSTHIERRITRTVMVGDIAIGSDYPVRVQSMINEDTMDVENAYLAIKRLHDVGCEIVRLTVPSLAH AKAVGDIKAKLLENNINTPLVADVHHNGMKIAMEVAKHVDKVRINPGLFVFEKSDPTRTEYTDEEFETIKQTILKRFTPL VEVLKAENKALRIGVNHGSLSERMLFTYGDTPLGMTESAMEFVKICDELDFHNIIISMKASRAPVMMAAYRMIADRLDSE GYNYPLHLGVTEAGDGDYGRIKSTAGIGTLLAEGLGDTIRVSLTEAPEKEIPVCYSILQSLGLRKTMVEYISCPSCGRTL FNLEEVVDKVRNATSHLTGLDIAIMGCIVNGPGEMADADYGYVGKGKGTIALYRRKEEIKRVPEDEGVNALIQLIKDDGK WIDP
Specific function: Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate [H]
COG id: COG0821
COG function: function code I; Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ispG family [H]
Homologues:
Organism=Escherichia coli, GI1788863, Length=388, Percent_Identity=36.8556701030928, Blast_Score=229, Evalue=3e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016425 - InterPro: IPR004588 [H]
Pfam domain/function: PF04551 GcpE [H]
EC number: =1.17.7.1 [H]
Molecular weight: Translated: 44898; Mature: 44767
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTQSKEVNSLSKRYSTHIERRITRTVMVGDIAIGSDYPVRVQSMINEDTMDVENAYLA CCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHCCCCCHHHHHHHH IKRLHDVGCEIVRLTVPSLAHAKAVGDIKAKLLENNINTPLVADVHHNGMKIAMEVAKHV HHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHH DKVRINPGLFVFEKSDPTRTEYTDEEFETIKQTILKRFTPLVEVLKAENKALRIGVNHGS HHEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC LSERMLFTYGDTPLGMTESAMEFVKICDELDFHNIIISMKASRAPVMMAAYRMIADRLDS CCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHCC EGYNYPLHLGVTEAGDGDYGRIKSTAGIGTLLAEGLGDTIRVSLTEAPEKEIPVCYSILQ CCCCCEEEEEEEECCCCCCCCEECCCHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHH SLGLRKTMVEYISCPSCGRTLFNLEEVVDKVRNATSHLTGLDIAIMGCIVNGPGEMADAD HHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCC YGYVGKGKGTIALYRRKEEIKRVPEDEGVNALIQLIKDDGKWIDP CCEEECCCCEEEEEECHHHHHCCCCCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure SLTQSKEVNSLSKRYSTHIERRITRTVMVGDIAIGSDYPVRVQSMINEDTMDVENAYLA CCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHCCCCCHHHHHHHH IKRLHDVGCEIVRLTVPSLAHAKAVGDIKAKLLENNINTPLVADVHHNGMKIAMEVAKHV HHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHH DKVRINPGLFVFEKSDPTRTEYTDEEFETIKQTILKRFTPLVEVLKAENKALRIGVNHGS HHEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC LSERMLFTYGDTPLGMTESAMEFVKICDELDFHNIIISMKASRAPVMMAAYRMIADRLDS CCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHCC EGYNYPLHLGVTEAGDGDYGRIKSTAGIGTLLAEGLGDTIRVSLTEAPEKEIPVCYSILQ CCCCCEEEEEEEECCCCCCCCEECCCHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHH SLGLRKTMVEYISCPSCGRTLFNLEEVVDKVRNATSHLTGLDIAIMGCIVNGPGEMADAD HHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCC YGYVGKGKGTIALYRRKEEIKRVPEDEGVNALIQLIKDDGKWIDP CCEEECCCCEEEEEECHHHHHCCCCCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12917642 [H]