Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

Click here to switch to the map view.

The map label for this gene is 123968257

Identifier: 123968257

GI number: 123968257

Start: 642039

End: 642482

Strand: Direct

Name: 123968257

Synonym: A9601_07221

Alternate gene names: NA

Gene position: 642039-642482 (Clockwise)

Preceding gene: 123968254

Following gene: 123968258

Centisome position: 38.45

GC content: 29.95

Gene sequence:

>444_bases
ATGAATATTATTTTTAGGGAAGTTGATCCTTTTAATTGTTGGATATGGATCAGGTTTTCAGAATCACCAACTCAAGACGA
AAAAAATTATTTAGATGGTGTTTTTGATAGTTGGTACGTTTTAGGAAGGTTAGGTGGATTTAATTCTGAAAATTTGCAAA
CTCATGAAGAGGGTTCCGATCTAAGTTGGATGTCCTATGATAATGACCAAAAAAATGCATCTCTTCCAGCCTTAATGCAT
AATTTAGGAATTATGGAATATCAAAATCTTTGGGGAAGATGTTGGGTTGATTTTGGAACTTCAGACTCTATTTCAATAGA
TATATTAATTAATTCTTTGAATGAGATATCAAATAATTATGTAAAAATTGAAGAGTTAATTATTGGGGGTGAAAATAATG
ATTGGTCAGTTGAAGAACATGAAGATTTAGTTTTCAAAGATTAA

Upstream 100 bases:

>100_bases
TCTTTTAAATCAAGCATTATTAATTAAGTTATAGGTATGAATTTGAATCTAGTAATAACTTACTTATAATAGCTTTAGAT
TTAAAAAGATATTAGTCAAT

Downstream 100 bases:

>100_bases
GTGTTTTAGATGGAAGACTTAACAAGATTAATTATTTCCCATGAAAGAATTGAAAATATTAAGAACAATAATTTAGAACT
TTCTAAAGAAGAGGCTCATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MNIIFREVDPFNCWIWIRFSESPTQDEKNYLDGVFDSWYVLGRLGGFNSENLQTHEEGSDLSWMSYDNDQKNASLPALMH
NLGIMEYQNLWGRCWVDFGTSDSISIDILINSLNEISNNYVKIEELIIGGENNDWSVEEHEDLVFKD

Sequences:

>Translated_147_residues
MNIIFREVDPFNCWIWIRFSESPTQDEKNYLDGVFDSWYVLGRLGGFNSENLQTHEEGSDLSWMSYDNDQKNASLPALMH
NLGIMEYQNLWGRCWVDFGTSDSISIDILINSLNEISNNYVKIEELIIGGENNDWSVEEHEDLVFKD
>Mature_147_residues
MNIIFREVDPFNCWIWIRFSESPTQDEKNYLDGVFDSWYVLGRLGGFNSENLQTHEEGSDLSWMSYDNDQKNASLPALMH
NLGIMEYQNLWGRCWVDFGTSDSISIDILINSLNEISNNYVKIEELIIGGENNDWSVEEHEDLVFKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17138; Mature: 17138

Theoretical pI: Translated: 3.86; Mature: 3.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIIFREVDPFNCWIWIRFSESPTQDEKNYLDGVFDSWYVLGRLGGFNSENLQTHEEGSD
CCEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHEEHHCCCCCCCCCCCCCCCCC
LSWMSYDNDQKNASLPALMHNLGIMEYQNLWGRCWVDFGTSDSISIDILINSLNEISNNY
EEEEECCCCCCCCCHHHHHHHCCCHHHHCCCEEEEEECCCCCCEEEEEEEECHHHHCCCE
VKIEELIIGGENNDWSVEEHEDLVFKD
EEEEEEEECCCCCCCCCCCCCCEEECC
>Mature Secondary Structure
MNIIFREVDPFNCWIWIRFSESPTQDEKNYLDGVFDSWYVLGRLGGFNSENLQTHEEGSD
CCEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHEEHHCCCCCCCCCCCCCCCCC
LSWMSYDNDQKNASLPALMHNLGIMEYQNLWGRCWVDFGTSDSISIDILINSLNEISNNY
EEEEECCCCCCCCCHHHHHHHCCCHHHHCCCEEEEEECCCCCCEEEEEEEECHHHHCCCE
VKIEELIIGGENNDWSVEEHEDLVFKD
EEEEEEEECCCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA