| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968244
Identifier: 123968244
GI number: 123968244
Start: 631631
End: 632065
Strand: Direct
Name: 123968244
Synonym: A9601_07091
Alternate gene names: NA
Gene position: 631631-632065 (Clockwise)
Preceding gene: 123968240
Following gene: 123968249
Centisome position: 37.82
GC content: 26.67
Gene sequence:
>435_bases TTGAATCAGATATTCCAGAGACTCTCATCAGTATTTTTGTATACTTTGCCATTAAAGGCATCAATACCTTTTGGATATTA CTTGTTCTATAAATATTCATTTTTAAAAATACTATTATTACTAACTTTCCCGATAGCCATAATTGAAAAATCTTTGCCTT TTGGTAGTTTTTTATTATTTATAATTTTGTTTGCTGGATTAGCAAGGAATCCAAATGTTCCCTATTTCGTTAGATATAAC GCATGCCAAGCATTACTTATCGATATTGCTTTAATAATAATTTCATATCTCTTGAGAATATTTCCAATAGTTGAATTAGG CTCAATAATTTTTATATTTACACTATGTATTTTTATTTATTCCATTTCTCAATGTATTTATGGAGTTGAACCTGAAATTC CCTTAATTAGTAAATCTGTAAGAATGCAAATCTAA
Upstream 100 bases:
>100_bases TTTATTAACCATCTGCAAAAGTTGAGATTTTTGATGCTAATTTTTAAATAAAGTTAAAATAAATTAAGATAAGGTATTAG TACTTAATTTCAACAGCATA
Downstream 100 bases:
>100_bases AAAGATTTATAGATTTACTGACTTTCTTCAGCACTCATTCAGAATAGATTCCCATCTTTGCTGACTTGCCTTTATTGCTT GCATTGGCGGATTAGTCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MNQIFQRLSSVFLYTLPLKASIPFGYYLFYKYSFLKILLLLTFPIAIIEKSLPFGSFLLFIILFAGLARNPNVPYFVRYN ACQALLIDIALIIISYLLRIFPIVELGSIIFIFTLCIFIYSISQCIYGVEPEIPLISKSVRMQI
Sequences:
>Translated_144_residues MNQIFQRLSSVFLYTLPLKASIPFGYYLFYKYSFLKILLLLTFPIAIIEKSLPFGSFLLFIILFAGLARNPNVPYFVRYN ACQALLIDIALIIISYLLRIFPIVELGSIIFIFTLCIFIYSISQCIYGVEPEIPLISKSVRMQI >Mature_144_residues MNQIFQRLSSVFLYTLPLKASIPFGYYLFYKYSFLKILLLLTFPIAIIEKSLPFGSFLLFIILFAGLARNPNVPYFVRYN ACQALLIDIALIIISYLLRIFPIVELGSIIFIFTLCIFIYSISQCIYGVEPEIPLISKSVRMQI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ycf60 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019109 [H]
Pfam domain/function: PF09685 Tic20 [H]
EC number: NA
Molecular weight: Translated: 16611; Mature: 16611
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQIFQRLSSVFLYTLPLKASIPFGYYLFYKYSFLKILLLLTFPIAIIEKSLPFGSFLLF CHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH IILFAGLARNPNVPYFVRYNACQALLIDIALIIISYLLRIFPIVELGSIIFIFTLCIFIY HHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SISQCIYGVEPEIPLISKSVRMQI HHHHHHHCCCCCCCHHHHHHHCCC >Mature Secondary Structure MNQIFQRLSSVFLYTLPLKASIPFGYYLFYKYSFLKILLLLTFPIAIIEKSLPFGSFLLF CHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH IILFAGLARNPNVPYFVRYNACQALLIDIALIIISYLLRIFPIVELGSIIFIFTLCIFIY HHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SISQCIYGVEPEIPLISKSVRMQI HHHHHHHCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]