| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968231
Identifier: 123968231
GI number: 123968231
Start: 618488
End: 619996
Strand: Direct
Name: 123968231
Synonym: A9601_06961
Alternate gene names: NA
Gene position: 618488-619996 (Clockwise)
Preceding gene: 123968228
Following gene: 123968232
Centisome position: 37.04
GC content: 27.83
Gene sequence:
>1509_bases ATGAAGAATAATTTCGTAGAAAACATCAAAGATGAAAAATATTTTTATTCATTAATTAATGATATAAAGAATAGCAAAGT TGGATTTTACAGTGTTGGTTTATATCCTGCATCACTAGCATACAACTGTGCTATGCATGGAAAATCAAATAATATTCTCT TGGCTCCTAGGGAAGATAGAGATTTGTTAGGTGCTTTCTCAAATGATGTTATTTCTGATATGGATAATGAGATTATTGAA AAGATTAAGAGAATGGGAAATTATTATTCAGAGGGAAAAATAAAGTCTTTTGATCTAAAAGATCTCCTCTTGAAATGTGA GATAGTTATTCTTGCTTCAAATAGTAATCACATACAAGATGATGTTAAAAATGCTTTAGAACTAAGAAAAAATTTAAAAA GAGAAAATGTGGTTCTTGGTTGCCTAGTCGGTTCTTTTTGTATTGATAATAAAAATAAAAACCCTTTTATTCTTTGCAAT AAATATCCAAATTTAGCCTTTTTTACAGGATTTCATCGTCACGGAGCTTTACGAAATCCTAATGATAGTTTTACTGCAAA TTTCTGCCATCCTGATGCGCTAACAGCATTAATAGGAGCACGCATTTTGAATCAATTATCACCGAAAATTCAAGTTTCTC CTGGAGTTCACAATATTGAATGTCAATATATAAAGTCTATAAAAAATATATCATCAATATTTGCAGGTTTTGTAAATAAC TTTCATTCCGATAAGCCAGGAATGCTGCCTACCATTAATACGATTTTGTTAACTCAATGTTTAGATCAGGCCGCATCAGT ATCAATAAAAGTTAGAAAAGAAAATAAATTAGAGAATAAATATCTTTCATTAAAAGAACTTGGTTATGGTGAAGAAATAA TTAGTGCAAGGGAAATAATTAATGATAAATTTTTTGAAAAAGGAGATTATACTTTTTCTCAATTAAATGCTGTTAAGGCT GATGTTTTAGGGAGTATGACTCTACCAACTGAAGGGAAACCAACACGGAATTTTCAAGCAGGACAAGTTTTATCAGATAT GCTTTTGCAACTCAACAGATGTCCAAAAGATGTCTCAGAATTTGTAAATTGGTGTAATAAATACTCTCTCAGTCAAGGAG GTTTAGAAGGTCTAAAATCTTTAAAATTTTGGCCAGACATTTATAAGGAATTCAAAATTAAAAATAACAATTGTTCAATG ATTAATCTGATTTATTTATGCTTTAATGCTAATTCAGAAGAGAAAAAAGAAATTTATAATGTTTTAATTAGTTCAGAAGA AATCACTAATTTTTGCCAAGAATCTGTGAAATCCGAATTATCTTTCGAACTAAATGAAAAATTAAAAGGAGATTATCTTT TTGATGATATTGAAAACTTTTATAAGAAATTATTTATTGAAAAAGAGCAAAATGCCCTTAAAACAAATGAAGACAGTAAT CAAATTTCTAAAAAAAATCCTAGTTATATTAAAGTATTGAAAATTATTAATAAATATTTTAATAATTGA
Upstream 100 bases:
>100_bases TATTTTCAATAAATAATTTGCTATGGTCAAAAATTGCTTTAATGTAGAAAAATGTTGATATGTGAAAAGAAATTAAAAAA ATTATCGAGAGTTTCCAAAA
Downstream 100 bases:
>100_bases TTATTTTTCTAATTTGCTAGAAAGCAAAGTTTTAATTTATTTACTAATCTTGATTGCAGGGTTAGAATTATTATGGTTTA AAAGGTTTTTTTTGAAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 502; Mature: 502
Protein sequence:
>502_residues MKNNFVENIKDEKYFYSLINDIKNSKVGFYSVGLYPASLAYNCAMHGKSNNILLAPREDRDLLGAFSNDVISDMDNEIIE KIKRMGNYYSEGKIKSFDLKDLLLKCEIVILASNSNHIQDDVKNALELRKNLKRENVVLGCLVGSFCIDNKNKNPFILCN KYPNLAFFTGFHRHGALRNPNDSFTANFCHPDALTALIGARILNQLSPKIQVSPGVHNIECQYIKSIKNISSIFAGFVNN FHSDKPGMLPTINTILLTQCLDQAASVSIKVRKENKLENKYLSLKELGYGEEIISAREIINDKFFEKGDYTFSQLNAVKA DVLGSMTLPTEGKPTRNFQAGQVLSDMLLQLNRCPKDVSEFVNWCNKYSLSQGGLEGLKSLKFWPDIYKEFKIKNNNCSM INLIYLCFNANSEEKKEIYNVLISSEEITNFCQESVKSELSFELNEKLKGDYLFDDIENFYKKLFIEKEQNALKTNEDSN QISKKNPSYIKVLKIINKYFNN
Sequences:
>Translated_502_residues MKNNFVENIKDEKYFYSLINDIKNSKVGFYSVGLYPASLAYNCAMHGKSNNILLAPREDRDLLGAFSNDVISDMDNEIIE KIKRMGNYYSEGKIKSFDLKDLLLKCEIVILASNSNHIQDDVKNALELRKNLKRENVVLGCLVGSFCIDNKNKNPFILCN KYPNLAFFTGFHRHGALRNPNDSFTANFCHPDALTALIGARILNQLSPKIQVSPGVHNIECQYIKSIKNISSIFAGFVNN FHSDKPGMLPTINTILLTQCLDQAASVSIKVRKENKLENKYLSLKELGYGEEIISAREIINDKFFEKGDYTFSQLNAVKA DVLGSMTLPTEGKPTRNFQAGQVLSDMLLQLNRCPKDVSEFVNWCNKYSLSQGGLEGLKSLKFWPDIYKEFKIKNNNCSM INLIYLCFNANSEEKKEIYNVLISSEEITNFCQESVKSELSFELNEKLKGDYLFDDIENFYKKLFIEKEQNALKTNEDSN QISKKNPSYIKVLKIINKYFNN >Mature_502_residues MKNNFVENIKDEKYFYSLINDIKNSKVGFYSVGLYPASLAYNCAMHGKSNNILLAPREDRDLLGAFSNDVISDMDNEIIE KIKRMGNYYSEGKIKSFDLKDLLLKCEIVILASNSNHIQDDVKNALELRKNLKRENVVLGCLVGSFCIDNKNKNPFILCN KYPNLAFFTGFHRHGALRNPNDSFTANFCHPDALTALIGARILNQLSPKIQVSPGVHNIECQYIKSIKNISSIFAGFVNN FHSDKPGMLPTINTILLTQCLDQAASVSIKVRKENKLENKYLSLKELGYGEEIISAREIINDKFFEKGDYTFSQLNAVKA DVLGSMTLPTEGKPTRNFQAGQVLSDMLLQLNRCPKDVSEFVNWCNKYSLSQGGLEGLKSLKFWPDIYKEFKIKNNNCSM INLIYLCFNANSEEKKEIYNVLISSEEITNFCQESVKSELSFELNEKLKGDYLFDDIENFYKKLFIEKEQNALKTNEDSN QISKKNPSYIKVLKIINKYFNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57281; Mature: 57281
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNNFVENIKDEKYFYSLINDIKNSKVGFYSVGLYPASLAYNCAMHGKSNNILLAPREDR CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHEECCCCCCEEECCCCCH DLLGAFSNDVISDMDNEIIEKIKRMGNYYSEGKIKSFDLKDLLLKCEIVILASNSNHIQD HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHEEEEEEEECCCCCHHH DVKNALELRKNLKRENVVLGCLVGSFCIDNKNKNPFILCNKYPNLAFFTGFHRHGALRNP HHHHHHHHHHHCCCCCEEEEEEHHHHHCCCCCCCCEEEEECCCCCEEEECHHHCCCCCCC NDSFTANFCHPDALTALIGARILNQLSPKIQVSPGVHNIECQYIKSIKNISSIFAGFVNN CCCCEECCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH FHSDKPGMLPTINTILLTQCLDQAASVSIKVRKENKLENKYLSLKELGYGEEIISAREII HCCCCCCCCHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHH NDKFFEKGDYTFSQLNAVKADVLGSMTLPTEGKPTRNFQAGQVLSDMLLQLNRCPKDVSE HHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHH FVNWCNKYSLSQGGLEGLKSLKFWPDIYKEFKIKNNNCSMINLIYLCFNANSEEKKEIYN HHHHHHHCCCCCCCHHHHHHHHHCHHHHHHHEECCCCCCEEEEEEEEECCCCHHHHHHHH VLISSEEITNFCQESVKSELSFELNEKLKGDYLFDDIENFYKKLFIEKEQNALKTNEDSN HHHCHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCH QISKKNPSYIKVLKIINKYFNN HHHCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MKNNFVENIKDEKYFYSLINDIKNSKVGFYSVGLYPASLAYNCAMHGKSNNILLAPREDR CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHEECCCCCCEEECCCCCH DLLGAFSNDVISDMDNEIIEKIKRMGNYYSEGKIKSFDLKDLLLKCEIVILASNSNHIQD HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHEEEEEEEECCCCCHHH DVKNALELRKNLKRENVVLGCLVGSFCIDNKNKNPFILCNKYPNLAFFTGFHRHGALRNP HHHHHHHHHHHCCCCCEEEEEEHHHHHCCCCCCCCEEEEECCCCCEEEECHHHCCCCCCC NDSFTANFCHPDALTALIGARILNQLSPKIQVSPGVHNIECQYIKSIKNISSIFAGFVNN CCCCEECCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH FHSDKPGMLPTINTILLTQCLDQAASVSIKVRKENKLENKYLSLKELGYGEEIISAREII HCCCCCCCCHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHH NDKFFEKGDYTFSQLNAVKADVLGSMTLPTEGKPTRNFQAGQVLSDMLLQLNRCPKDVSE HHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHH FVNWCNKYSLSQGGLEGLKSLKFWPDIYKEFKIKNNNCSMINLIYLCFNANSEEKKEIYN HHHHHHHCCCCCCCHHHHHHHHHCHHHHHHHEECCCCCCEEEEEEEEECCCCHHHHHHHH VLISSEEITNFCQESVKSELSFELNEKLKGDYLFDDIENFYKKLFIEKEQNALKTNEDSN HHHCHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCH QISKKNPSYIKVLKIINKYFNN HHHCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA