| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is yfeA [H]
Identifier: 123968192
GI number: 123968192
Start: 581067
End: 581966
Strand: Direct
Name: yfeA [H]
Synonym: A9601_06571
Alternate gene names: 123968192
Gene position: 581067-581966 (Clockwise)
Preceding gene: 123968191
Following gene: 123968193
Centisome position: 34.8
GC content: 31.89
Gene sequence:
>900_bases ATGAAAAAAAATATTCTTTTTTTAAGTTTGATACTTCTGCTTTCGCTTGCTTCAGGCTCATGTAAGAGAACATCAAATAA AAATGAAACTAAAGAAGTAATACTGGCAAGTTTCACTGTTTTGGCGGACATGATTAGCAATGTCGCTAAAGATGATTTTA TTGTTAGATCAATTACGAAACCTGGAGTTGAGGTCCATGGCTACCAACCAACTCCAAGCGATTTGGTAAACGCCTCTAAT GCTTTTGTTTTTATTGATAATGGATTTGGATTTGAATTATGGGCTGAAAAATTTGTTTCTAATTTAAAAGTTAAAAGAAT TACTGTCGCAGAAGATTTGGATCCTATTTTTATCAGTGAAGATTTTTATAAAGGGAAACCAAATCCTCATGCTTGGATTT CTCCAAAAAGAGGGATCAAATACGTAGATATTATCGTGGATTCTTTATCAGAATTGAGGTCATCCAAAAGGAAATTATTT AAAGAAAATGGAAAAATTTATAAAGATAGACTATCTAAAATAGATAAAGAATTCTCACTTTTTATTAATAACTTAAATAA AGACAGGAGGTATCTAGTAAGTTGTGAAGGGGCTTTTTCATATCTAACAAATGATTATGGATTAGAGGAAGTTTATTTAT GGCCAGTTAATGCTGAGAGTCAAATTACTCCCAAAAGAATGGCAAGAACAATCTCACTAGTTAAAGAAAAAAATGTTCCA TCTGTATTTTGCGAAAGTACTGTAAGTAACGAATCTCAAATGGTTGTTGCGAAAGAAACTGGGGCTAATTTTGGAGGAAA TCTTTTTGTTGATTCATTATCTGATGATAGTGGGCCTGCTAGTTCCTACATGAAAATGCTTGAGCATAATTTGGAATTGA TAAAAAAAGGGCTTTTTTGA
Upstream 100 bases:
>100_bases TTGAAAAAGAAAAAATAAATTGGAAAGGATTTATTTCTGATCTTAGAAAACCACTTATGAAACTATCTTTTAGTTCATAA TCTAAGGATGAATTTTAAAT
Downstream 100 bases:
>100_bases ATTATGGAAACAATCAATTATCAAAACTTTAGGATTGAGGCAGAGAATATTTGCGTAGATTACAACGGTAAGGTGGCTTT GTATGATGCCAATTTAAGAT
Product: ABC transporter substrate-binding protein
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MKKNILFLSLILLLSLASGSCKRTSNKNETKEVILASFTVLADMISNVAKDDFIVRSITKPGVEVHGYQPTPSDLVNASN AFVFIDNGFGFELWAEKFVSNLKVKRITVAEDLDPIFISEDFYKGKPNPHAWISPKRGIKYVDIIVDSLSELRSSKRKLF KENGKIYKDRLSKIDKEFSLFINNLNKDRRYLVSCEGAFSYLTNDYGLEEVYLWPVNAESQITPKRMARTISLVKEKNVP SVFCESTVSNESQMVVAKETGANFGGNLFVDSLSDDSGPASSYMKMLEHNLELIKKGLF
Sequences:
>Translated_299_residues MKKNILFLSLILLLSLASGSCKRTSNKNETKEVILASFTVLADMISNVAKDDFIVRSITKPGVEVHGYQPTPSDLVNASN AFVFIDNGFGFELWAEKFVSNLKVKRITVAEDLDPIFISEDFYKGKPNPHAWISPKRGIKYVDIIVDSLSELRSSKRKLF KENGKIYKDRLSKIDKEFSLFINNLNKDRRYLVSCEGAFSYLTNDYGLEEVYLWPVNAESQITPKRMARTISLVKEKNVP SVFCESTVSNESQMVVAKETGANFGGNLFVDSLSDDSGPASSYMKMLEHNLELIKKGLF >Mature_299_residues MKKNILFLSLILLLSLASGSCKRTSNKNETKEVILASFTVLADMISNVAKDDFIVRSITKPGVEVHGYQPTPSDLVNASN AFVFIDNGFGFELWAEKFVSNLKVKRITVAEDLDPIFISEDFYKGKPNPHAWISPKRGIKYVDIIVDSLSELRSSKRKLF KENGKIYKDRLSKIDKEFSLFINNLNKDRRYLVSCEGAFSYLTNDYGLEEVYLWPVNAESQITPKRMARTISLVKEKNVP SVFCESTVSNESQMVVAKETGANFGGNLFVDSLSDDSGPASSYMKMLEHNLELIKKGLF
Specific function: Part of an ATP-driven transport system yfeABCD for chelated iron [H]
COG id: COG0803
COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface adhesin
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 9 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006127 - InterPro: IPR006129 - InterPro: IPR006128 [H]
Pfam domain/function: PF01297 SBP_bac_9 [H]
EC number: NA
Molecular weight: Translated: 33670; Mature: 33670
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNILFLSLILLLSLASGSCKRTSNKNETKEVILASFTVLADMISNVAKDDFIVRSITK CCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHCC PGVEVHGYQPTPSDLVNASNAFVFIDNGFGFELWAEKFVSNLKVKRITVAEDLDPIFISE CCCEEECCCCCHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCEEECC DFYKGKPNPHAWISPKRGIKYVDIIVDSLSELRSSKRKLFKENGKIYKDRLSKIDKEFSL HHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH FINNLNKDRRYLVSCEGAFSYLTNDYGLEEVYLWPVNAESQITPKRMARTISLVKEKNVP HHHHCCCCCEEEEEECHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCC SVFCESTVSNESQMVVAKETGANFGGNLFVDSLSDDSGPASSYMKMLEHNLELIKKGLF HHHHHHHCCCCCEEEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKNILFLSLILLLSLASGSCKRTSNKNETKEVILASFTVLADMISNVAKDDFIVRSITK CCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHCC PGVEVHGYQPTPSDLVNASNAFVFIDNGFGFELWAEKFVSNLKVKRITVAEDLDPIFISE CCCEEECCCCCHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCEEECC DFYKGKPNPHAWISPKRGIKYVDIIVDSLSELRSSKRKLFKENGKIYKDRLSKIDKEFSL HHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH FINNLNKDRRYLVSCEGAFSYLTNDYGLEEVYLWPVNAESQITPKRMARTISLVKEKNVP HHHHCCCCCEEEEEECHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCC SVFCESTVSNESQMVVAKETGANFGGNLFVDSLSDDSGPASSYMKMLEHNLELIKKGLF HHHHHHHCCCCCEEEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9495751; 11586360; 12142430 [H]