| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968162
Identifier: 123968162
GI number: 123968162
Start: 548567
End: 548887
Strand: Direct
Name: 123968162
Synonym: A9601_06271
Alternate gene names: NA
Gene position: 548567-548887 (Clockwise)
Preceding gene: 123968161
Following gene: 161353817
Centisome position: 32.85
GC content: 28.66
Gene sequence:
>321_bases TTGACTAAAGGAAAAGTTATACAAATAGGTTTATTTATTTCATTAATAGGATTAATTAGTTATAAATTTGCACCGCAAAT TGGTATCGATAATTTTACAGCGACTACTTTATCGAGTTGCATCTTGATTTTGATTGTTATTACTTGGGTAACATCTTATG TTTATAGAGTTGTGAATGGGAAAATGACTTTTATGGAACAAAGGAAGCGTTATAGAAAAGAGTACGAAAAAGTTGTTAAT GATAAACTAGAAACCAAATTCAATTCATTGTCAAAGGAAGAGCAGCAAAAACTTATGGAAGATTTAGAGAAAAATCCATA A
Upstream 100 bases:
>100_bases TTAGGAATTTATGGCCTTGTATTTCTTTTCTTTCCAGGTTTAATTTTATTTTCTCCATTTTTAAATCTCAGACTAAAAGG AAGTGGTAAAGGGTAAATAA
Downstream 100 bases:
>100_bases ATTTTTCATAGAAAAATATCTAAAAATTATGAAAGATAACAAAATGCAAATTAATAAAAATGAATCTTTATCTAAGGTAG ATGAAATGTTTAGTGAGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MTKGKVIQIGLFISLIGLISYKFAPQIGIDNFTATTLSSCILILIVITWVTSYVYRVVNGKMTFMEQRKRYRKEYEKVVN DKLETKFNSLSKEEQQKLMEDLEKNP
Sequences:
>Translated_106_residues MTKGKVIQIGLFISLIGLISYKFAPQIGIDNFTATTLSSCILILIVITWVTSYVYRVVNGKMTFMEQRKRYRKEYEKVVN DKLETKFNSLSKEEQQKLMEDLEKNP >Mature_105_residues TKGKVIQIGLFISLIGLISYKFAPQIGIDNFTATTLSSCILILIVITWVTSYVYRVVNGKMTFMEQRKRYRKEYEKVVND KLETKFNSLSKEEQQKLMEDLEKNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12346; Mature: 12215
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKGKVIQIGLFISLIGLISYKFAPQIGIDNFTATTLSSCILILIVITWVTSYVYRVVNG CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KMTFMEQRKRYRKEYEKVVNDKLETKFNSLSKEEQQKLMEDLEKNP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC >Mature Secondary Structure TKGKVIQIGLFISLIGLISYKFAPQIGIDNFTATTLSSCILILIVITWVTSYVYRVVNG CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KMTFMEQRKRYRKEYEKVVNDKLETKFNSLSKEEQQKLMEDLEKNP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA