| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
Click here to switch to the map view.
The map label for this gene is ucpA [C]
Identifier: 123968126
GI number: 123968126
Start: 516558
End: 517292
Strand: Direct
Name: ucpA [C]
Synonym: A9601_05911
Alternate gene names: 123968126
Gene position: 516558-517292 (Clockwise)
Preceding gene: 123968125
Following gene: 123968127
Centisome position: 30.93
GC content: 36.6
Gene sequence:
>735_bases GTGAAATCCCCCAAAAAACCGAATAACTTGAAACTAGCTTTTATAACGGGTGCTACGAAAGGTATTGGTAGATCTACCGC AATTACTTTTGCCAATGCTGGCTGGGATTTAATTTTACTCTCCAGGAATATGGATTTAATGGAGAAACTAAAGAGCGAAC TGTTGACCACTAAATCAAAAATTAACTTAGTAAAATGTGATTTATCTAATCCTCTAGAAATAAAGCATTGTGTTAAAGAG GCAATTGACAAGTATGGGTGCCCTTCAGTATTGATAAATAATGCAGGTTGCGCATTTAATGGCCCTTTAGTTGAAATGGA ATTAGGTCAATGGGAACAAACTATTCAAATAAACCTCACAAGTGTTTTTCAAATTTGTAGTTCAATCATTCCTCACATGA GAAAAAATGGTGGTTTAGTTATTAATGTTAGTAGTCATGCTTCTTATAATGCATTCCCCCAATGGGGAGCTTATTGTGTT TCAAAATCTGCACTAGCTATGTTTACTAAATGCTTGAGGGAGGAGGAGAGGTCTAATTCAATAAGAGCGTGCACAATAAC TCTGGGTTCAGTAAATACTCCTCTTTGGGACTCCGAATCAATCAATTCTGATTTTGATAGAACTTCTATGCTCTCCTCAA AAGAGGTATCAGAAACTATTCTCTACATGGCTCAAAAACCTGAATCACAATTGATCGAAGACTTGACTTTGATGCCTTCT GGCGGAGCCTTTTAA
Upstream 100 bases:
>100_bases CTACTTCAAATGCCTGAAGACCAATTAATTGAGGAAAGATACAAAAAGTTCAGGATTTTAGGTAAATTTATCGAAGCAAA TAATATTGAAGAGATTTATA
Downstream 100 bases:
>100_bases ACATTCTGTCTATCTGATTAATCTTAAAACAGTGATTTTTTTTAGTGCTATTTGAACCCGATTGAACAAGCGAATGTGAT ATAGTATATGAGCAATTAAG
Product: short chain dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MKSPKKPNNLKLAFITGATKGIGRSTAITFANAGWDLILLSRNMDLMEKLKSELLTTKSKINLVKCDLSNPLEIKHCVKE AIDKYGCPSVLINNAGCAFNGPLVEMELGQWEQTIQINLTSVFQICSSIIPHMRKNGGLVINVSSHASYNAFPQWGAYCV SKSALAMFTKCLREEERSNSIRACTITLGSVNTPLWDSESINSDFDRTSMLSSKEVSETILYMAQKPESQLIEDLTLMPS GGAF
Sequences:
>Translated_244_residues MKSPKKPNNLKLAFITGATKGIGRSTAITFANAGWDLILLSRNMDLMEKLKSELLTTKSKINLVKCDLSNPLEIKHCVKE AIDKYGCPSVLINNAGCAFNGPLVEMELGQWEQTIQINLTSVFQICSSIIPHMRKNGGLVINVSSHASYNAFPQWGAYCV SKSALAMFTKCLREEERSNSIRACTITLGSVNTPLWDSESINSDFDRTSMLSSKEVSETILYMAQKPESQLIEDLTLMPS GGAF >Mature_244_residues MKSPKKPNNLKLAFITGATKGIGRSTAITFANAGWDLILLSRNMDLMEKLKSELLTTKSKINLVKCDLSNPLEIKHCVKE AIDKYGCPSVLINNAGCAFNGPLVEMELGQWEQTIQINLTSVFQICSSIIPHMRKNGGLVINVSSHASYNAFPQWGAYCV SKSALAMFTKCLREEERSNSIRACTITLGSVNTPLWDSESINSDFDRTSMLSSKEVSETILYMAQKPESQLIEDLTLMPS GGAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI20149619, Length=242, Percent_Identity=27.6859504132231, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI31542939, Length=198, Percent_Identity=30.8080808080808, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI142976729, Length=175, Percent_Identity=32, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI109715829, Length=246, Percent_Identity=25.609756097561, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI224922801, Length=168, Percent_Identity=31.547619047619, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI5031737, Length=191, Percent_Identity=31.413612565445, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI33667109, Length=191, Percent_Identity=31.413612565445, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI4557649, Length=193, Percent_Identity=26.9430051813472, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI32483357, Length=191, Percent_Identity=26.7015706806283, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI19923817, Length=248, Percent_Identity=21.7741935483871, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI7705925, Length=217, Percent_Identity=26.2672811059908, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI226371731, Length=176, Percent_Identity=27.2727272727273, Blast_Score=72, Evalue=3e-13, Organism=Homo sapiens, GI157739938, Length=184, Percent_Identity=29.3478260869565, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI4503817, Length=229, Percent_Identity=26.6375545851528, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI7705855, Length=175, Percent_Identity=26.8571428571429, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI59889578, Length=169, Percent_Identity=27.2189349112426, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI210032110, Length=166, Percent_Identity=27.710843373494, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI40254992, Length=236, Percent_Identity=22.4576271186441, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI22507405, Length=196, Percent_Identity=25.5102040816327, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI126723191, Length=180, Percent_Identity=26.1111111111111, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI7706318, Length=169, Percent_Identity=25.4437869822485, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI40254986, Length=183, Percent_Identity=25.1366120218579, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI40548397, Length=190, Percent_Identity=28.9473684210526, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI214010158, Length=190, Percent_Identity=28.9473684210526, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI214010156, Length=190, Percent_Identity=28.9473684210526, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI22758144, Length=190, Percent_Identity=28.9473684210526, Blast_Score=66, Evalue=3e-11, Organism=Escherichia coli, GI87082100, Length=190, Percent_Identity=34.7368421052632, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1788459, Length=189, Percent_Identity=26.4550264550265, Blast_Score=84, Evalue=6e-18, Organism=Escherichia coli, GI1787335, Length=244, Percent_Identity=25.4098360655738, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1787905, Length=148, Percent_Identity=31.7567567567568, Blast_Score=80, Evalue=8e-17, Organism=Escherichia coli, GI1786701, Length=190, Percent_Identity=29.4736842105263, Blast_Score=77, Evalue=9e-16, Organism=Escherichia coli, GI1787820, Length=237, Percent_Identity=23.6286919831224, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI2367175, Length=206, Percent_Identity=27.6699029126214, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1789208, Length=203, Percent_Identity=25.1231527093596, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1787526, Length=194, Percent_Identity=25.2577319587629, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI87082160, Length=188, Percent_Identity=27.1276595744681, Blast_Score=65, Evalue=6e-12, Organism=Caenorhabditis elegans, GI71994604, Length=247, Percent_Identity=27.5303643724696, Blast_Score=103, Evalue=6e-23, Organism=Caenorhabditis elegans, GI17562908, Length=196, Percent_Identity=31.6326530612245, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI71994600, Length=236, Percent_Identity=29.2372881355932, Blast_Score=101, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17562906, Length=256, Percent_Identity=27.34375, Blast_Score=100, Evalue=8e-22, Organism=Caenorhabditis elegans, GI193204405, Length=256, Percent_Identity=26.5625, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17559104, Length=258, Percent_Identity=25.968992248062, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17531453, Length=256, Percent_Identity=26.5625, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17538480, Length=256, Percent_Identity=25.78125, Blast_Score=90, Evalue=9e-19, Organism=Caenorhabditis elegans, GI17551412, Length=258, Percent_Identity=25.5813953488372, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17562904, Length=258, Percent_Identity=25.5813953488372, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17561402, Length=249, Percent_Identity=26.9076305220884, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17560150, Length=254, Percent_Identity=25.1968503937008, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17562910, Length=258, Percent_Identity=26.3565891472868, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI72000259, Length=256, Percent_Identity=26.5625, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17560332, Length=259, Percent_Identity=25.0965250965251, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17560220, Length=257, Percent_Identity=23.7354085603113, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17538486, Length=193, Percent_Identity=29.0155440414508, Blast_Score=81, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17544670, Length=264, Percent_Identity=26.1363636363636, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17563726, Length=256, Percent_Identity=25.78125, Blast_Score=80, Evalue=7e-16, Organism=Caenorhabditis elegans, GI25147288, Length=242, Percent_Identity=26.0330578512397, Blast_Score=80, Evalue=8e-16, Organism=Caenorhabditis elegans, GI17560176, Length=237, Percent_Identity=29.957805907173, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17562990, Length=251, Percent_Identity=24.3027888446215, Blast_Score=79, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17559552, Length=250, Percent_Identity=26.8, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17565030, Length=259, Percent_Identity=25.4826254826255, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17570069, Length=198, Percent_Identity=27.7777777777778, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17560676, Length=187, Percent_Identity=25.668449197861, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI115534694, Length=221, Percent_Identity=27.1493212669683, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17555706, Length=242, Percent_Identity=27.2727272727273, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17557668, Length=252, Percent_Identity=25.3968253968254, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17508895, Length=206, Percent_Identity=25.2427184466019, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI25152911, Length=249, Percent_Identity=25.3012048192771, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17564282, Length=162, Percent_Identity=29.0123456790123, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI212646214, Length=200, Percent_Identity=28, Blast_Score=70, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6323882, Length=246, Percent_Identity=27.2357723577236, Blast_Score=104, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6322226, Length=188, Percent_Identity=28.7234042553192, Blast_Score=77, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6322227, Length=194, Percent_Identity=26.8041237113402, Blast_Score=67, Evalue=3e-12, Organism=Drosophila melanogaster, GI23397609, Length=233, Percent_Identity=30.4721030042918, Blast_Score=102, Evalue=2e-22, Organism=Drosophila melanogaster, GI116007236, Length=243, Percent_Identity=26.7489711934156, Blast_Score=101, Evalue=4e-22, Organism=Drosophila melanogaster, GI24644339, Length=245, Percent_Identity=28.5714285714286, Blast_Score=98, Evalue=4e-21, Organism=Drosophila melanogaster, GI21357041, Length=245, Percent_Identity=26.9387755102041, Blast_Score=98, Evalue=6e-21, Organism=Drosophila melanogaster, GI28571526, Length=232, Percent_Identity=27.1551724137931, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI21355319, Length=201, Percent_Identity=31.3432835820896, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI24663911, Length=246, Percent_Identity=26.0162601626016, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24641232, Length=243, Percent_Identity=27.5720164609054, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24639444, Length=243, Percent_Identity=25.9259259259259, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI28571387, Length=249, Percent_Identity=26.5060240963855, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24643142, Length=176, Percent_Identity=30.6818181818182, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI281364494, Length=247, Percent_Identity=26.7206477732794, Blast_Score=78, Evalue=6e-15, Organism=Drosophila melanogaster, GI24641388, Length=245, Percent_Identity=27.7551020408163, Blast_Score=77, Evalue=8e-15, Organism=Drosophila melanogaster, GI116007238, Length=176, Percent_Identity=27.8409090909091, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI21358495, Length=234, Percent_Identity=26.9230769230769, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI116007234, Length=247, Percent_Identity=26.7206477732794, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI24648944, Length=236, Percent_Identity=27.1186440677966, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI281364892, Length=186, Percent_Identity=27.4193548387097, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI17737361, Length=198, Percent_Identity=26.2626262626263, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24580925, Length=177, Percent_Identity=26.5536723163842, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI24651139, Length=196, Percent_Identity=27.5510204081633, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI24665243, Length=233, Percent_Identity=25.3218884120172, Blast_Score=64, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 26849; Mature: 26849
Theoretical pI: Translated: 7.98; Mature: 7.98
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSPKKPNNLKLAFITGATKGIGRSTAITFANAGWDLILLSRNMDLMEKLKSELLTTKSK CCCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHH INLVKCDLSNPLEIKHCVKEAIDKYGCPSVLINNAGCAFNGPLVEMELGQWEQTIQINLT CEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCEECCCEEEEECCCCCEEEEEEHH SVFQICSSIIPHMRKNGGLVINVSSHASYNAFPQWGAYCVSKSALAMFTKCLREEERSNS HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC IRACTITLGSVNTPLWDSESINSDFDRTSMLSSKEVSETILYMAQKPESQLIEDLTLMPS EEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEECCC GGAF CCCC >Mature Secondary Structure MKSPKKPNNLKLAFITGATKGIGRSTAITFANAGWDLILLSRNMDLMEKLKSELLTTKSK CCCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHH INLVKCDLSNPLEIKHCVKEAIDKYGCPSVLINNAGCAFNGPLVEMELGQWEQTIQINLT CEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCEECCCEEEEECCCCCEEEEEEHH SVFQICSSIIPHMRKNGGLVINVSSHASYNAFPQWGAYCVSKSALAMFTKCLREEERSNS HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC IRACTITLGSVNTPLWDSESINSDFDRTSMLSSKEVSETILYMAQKPESQLIEDLTLMPS EEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEECCC GGAF CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA