| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968081
Identifier: 123968081
GI number: 123968081
Start: 472492
End: 473448
Strand: Direct
Name: 123968081
Synonym: A9601_05441
Alternate gene names: NA
Gene position: 472492-473448 (Clockwise)
Preceding gene: 123968080
Following gene: 123968086
Centisome position: 28.29
GC content: 26.54
Gene sequence:
>957_bases ATGAGATTTAATATAAGTAAGCAACAATATTTGAAATTCATTAAAAAAATTAATTTTGGTAATTTAAAGAGTATTTTCTT TATTTCAAGCTTGTTATATTTTTGCATCTATTTTTTTGATAATATTGATCGAATTTCTTTTGATATTAATTTAGAAAGAA ATGGAATTAATCTATTCTTATCATTTTTATTTTGTGTTTTAAGTATTTACTTGAACGCTTATGCATGGAAATATATTGTT AAATGGTTCGGGAAAGAATTTAAAAGTAATAACCTAATCTCTTTTTATGTTTTAACTAATATTCTTAAATATGTTCCAGG AGGGGTTTGGCATTTTGTTGAAAGATTTAATTTTATAAAAAAAATAAGTAATCCAAAGATTGCTTTATATTCGACGCTCA TAGAACCTTATTTTATGTTGAGTGGATCTTTTCTCTTGGCATCGGTTGGATTGATTTTTTCACCACTTTATTTTTTTTTA ATTTCTCCTTTAGTATTCTTAAATAGGAAATTAGTTTATCTTATTTTAAAAAGAATAGGGCTTCTTAAAGGAAAAGTATT TGAGGTTTTGAGACTTCCAAATTCAAAGGACCATTTTGCAGAGAGAATAAATATAATTTCTTTTTTCCCTACTAGAGCTT TATTACTTGAAATTGGTTTTGTTTTATCTAAATTTGTTGGTTTTTATATTTGCTTAAATGCCTTTTATACAACTAATAAT CTGAACATTATATTTTTATTGGTAATCTTTTCTTTGTCATGGTCTTTAGGCTTGGTAGTCCCAGCAGCTCCAGGAGGACT TGGGGTTTTTGAGGCTTGCCTCCTTTTATTTGTGGGCAAAAGTATTCCACAAAATGTAATTCTTATTAGCTTAGTTTATT ATAGGGTTATATCTACCTCGGCAGATTTGTTCTTAAGCCTACCTTTCTTAATAAGAAAATTTTCTAAAAGAATTTAG
Upstream 100 bases:
>100_bases AGGTTTTGAGATTACAACTAGAGCATAAAATATCAACTTACGAAATAAGAACAATAATAAAAGAATCAGGTGAAAAATTT AAAGCATTTGAAAACTGGAA
Downstream 100 bases:
>100_bases TTTTTTTTCTCTAAGCTTGGTATCAATGTAATTGATGCAATAAGGCCTAAAGTCATGATAAAAATGGCTGGTAATATCGC CTCTACCATTCTTTCATCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MRFNISKQQYLKFIKKINFGNLKSIFFISSLLYFCIYFFDNIDRISFDINLERNGINLFLSFLFCVLSIYLNAYAWKYIV KWFGKEFKSNNLISFYVLTNILKYVPGGVWHFVERFNFIKKISNPKIALYSTLIEPYFMLSGSFLLASVGLIFSPLYFFL ISPLVFLNRKLVYLILKRIGLLKGKVFEVLRLPNSKDHFAERINIISFFPTRALLLEIGFVLSKFVGFYICLNAFYTTNN LNIIFLLVIFSLSWSLGLVVPAAPGGLGVFEACLLLFVGKSIPQNVILISLVYYRVISTSADLFLSLPFLIRKFSKRI
Sequences:
>Translated_318_residues MRFNISKQQYLKFIKKINFGNLKSIFFISSLLYFCIYFFDNIDRISFDINLERNGINLFLSFLFCVLSIYLNAYAWKYIV KWFGKEFKSNNLISFYVLTNILKYVPGGVWHFVERFNFIKKISNPKIALYSTLIEPYFMLSGSFLLASVGLIFSPLYFFL ISPLVFLNRKLVYLILKRIGLLKGKVFEVLRLPNSKDHFAERINIISFFPTRALLLEIGFVLSKFVGFYICLNAFYTTNN LNIIFLLVIFSLSWSLGLVVPAAPGGLGVFEACLLLFVGKSIPQNVILISLVYYRVISTSADLFLSLPFLIRKFSKRI >Mature_318_residues MRFNISKQQYLKFIKKINFGNLKSIFFISSLLYFCIYFFDNIDRISFDINLERNGINLFLSFLFCVLSIYLNAYAWKYIV KWFGKEFKSNNLISFYVLTNILKYVPGGVWHFVERFNFIKKISNPKIALYSTLIEPYFMLSGSFLLASVGLIFSPLYFFL ISPLVFLNRKLVYLILKRIGLLKGKVFEVLRLPNSKDHFAERINIISFFPTRALLLEIGFVLSKFVGFYICLNAFYTTNN LNIIFLLVIFSLSWSLGLVVPAAPGGLGVFEACLLLFVGKSIPQNVILISLVYYRVISTSADLFLSLPFLIRKFSKRI
Specific function: Unknown
COG id: COG0392
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36881; Mature: 36881
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFNISKQQYLKFIKKINFGNLKSIFFISSLLYFCIYFFDNIDRISFDINLERNGINLFL CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCHHHHHH SFLFCVLSIYLNAYAWKYIVKWFGKEFKSNNLISFYVLTNILKYVPGGVWHFVERFNFIK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH KISNPKIALYSTLIEPYFMLSGSFLLASVGLIFSPLYFFLISPLVFLNRKLVYLILKRIG HHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLKGKVFEVLRLPNSKDHFAERINIISFFPTRALLLEIGFVLSKFVGFYICLNAFYTTNN HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LNIIFLLVIFSLSWSLGLVVPAAPGGLGVFEACLLLFVGKSIPQNVILISLVYYRVISTS CHHHHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC ADLFLSLPFLIRKFSKRI HHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRFNISKQQYLKFIKKINFGNLKSIFFISSLLYFCIYFFDNIDRISFDINLERNGINLFL CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCHHHHHH SFLFCVLSIYLNAYAWKYIVKWFGKEFKSNNLISFYVLTNILKYVPGGVWHFVERFNFIK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH KISNPKIALYSTLIEPYFMLSGSFLLASVGLIFSPLYFFLISPLVFLNRKLVYLILKRIG HHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLKGKVFEVLRLPNSKDHFAERINIISFFPTRALLLEIGFVLSKFVGFYICLNAFYTTNN HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LNIIFLLVIFSLSWSLGLVVPAAPGGLGVFEACLLLFVGKSIPQNVILISLVYYRVISTS CHHHHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC ADLFLSLPFLIRKFSKRI HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA