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The map label for this gene is ybhR [C]

Identifier: 123968042

GI number: 123968042

Start: 440366

End: 441190

Strand: Direct

Name: ybhR [C]

Synonym: A9601_05051

Alternate gene names: 123968042

Gene position: 440366-441190 (Clockwise)

Preceding gene: 123968041

Following gene: 123968043

Centisome position: 26.37

GC content: 31.76

Gene sequence:

>825_bases
ATGGAATTAAAAGAATATAATTTATTTTTTTTATATCAAGAAACATTTGCTTTAACAAAAAGATTATTTATCCAATTAAA
AAGAAGACCTTCAACTCTTTTAGCTGGAATATTACAACCCATAATTTGGCTTTTTTTATTTGGGGCATTATTCTCTAAAG
CTCCTGAGGGTTTTTTACCAGGAGTTGATTCTTATGGGAATTTTTTAGGAGCGGGACTTATTGTTTTTACTGCTTTTAGC
GGAGCCCTAAACTCTGGCCTTCCTTTAATGTTTGATAGAGAGTTTGGATTTCTTAATAGATTACTCGTAGCTCCTTTGAC
CAGTAGATTATCCATAGTTTTATCTTCTTTTTTTTACATAACAATCCTGAGCTTTGTTCAGAGTATTGTAATAATGGTTG
TTTCATACATTTTGGGTTATGGATGGCCCAACTTATATGGTCTAGGAATTGTTTTTACAACACTTATTCTATTAGTTCTT
TTTGTGACATCAATAAGTTTATGTTTAGCATTTGTTTTGCCTGGACATATTGAATTAATCGCACTTATATTTGTGATAAA
CTTACCTCTTCTTTTCGCGAGCACTGCTTTAGCTCCAATCTCATTCATGCCAAATTGGCTTGGGTGGTTAGCATCACTAA
ATCCATTAACTTTTGCGATTGAACCTATTAGGACTGCTTACACAGAAACTATGAATTTAGAATTAGTGGCTTTACATGCC
CCATATGGTGATTTAACTTGTAAGAGTTGTATATCAATTTTATTTTCTTTAACAGTTTTTTCCTTGATTATCATAAGGCC
TCTGTTAAACAGAAAGTTAAATTAA

Upstream 100 bases:

>100_bases
CTATGGCAGGGAAAAGAGACCTTAAAAAAGAATCAAAGCAATCAATGCGATAAAAAACTTTTGGTTAAATAACTATAATG
AAAATTAATTACTGCTAATT

Downstream 100 bases:

>100_bases
TAAATTTATGCTTTTAAAAAATCATCTAATAGAAGTTTTTAAAAAAGCCTCTTTAGAAAATAATATTTTGCTTAAAGAAA
ATATTGTTTTTAAGTGGGTC

Product: putative multidrug efflux ABC transporter

Products: NA

Alternate protein names: ABC Transporter Permease Protein; Multidrug Efflux ABC Transporter; ABC-Type Multidrug Transport System Permease Component; ABC Transporter; ABC-2 Type Transporter Superfamily; Multidrug ABC Transporter Permease Protein; ABC-Type Drug Export System Membrane Protein; ABC-2 Type Transport System Permease Protein; Daunorubicin Resistance ABC Transporter Membrane Protein; ABC-Type Multidrug Transport System ATPase Component; Multidrug ABC Transporter; Drug Exporter ABC Transporter Permease; Multidrug ABC Transporter Permease Component; ABC-Type Drug Export System; ABC-2 Type Tranporter

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MELKEYNLFFLYQETFALTKRLFIQLKRRPSTLLAGILQPIIWLFLFGALFSKAPEGFLPGVDSYGNFLGAGLIVFTAFS
GALNSGLPLMFDREFGFLNRLLVAPLTSRLSIVLSSFFYITILSFVQSIVIMVVSYILGYGWPNLYGLGIVFTTLILLVL
FVTSISLCLAFVLPGHIELIALIFVINLPLLFASTALAPISFMPNWLGWLASLNPLTFAIEPIRTAYTETMNLELVALHA
PYGDLTCKSCISILFSLTVFSLIIIRPLLNRKLN

Sequences:

>Translated_274_residues
MELKEYNLFFLYQETFALTKRLFIQLKRRPSTLLAGILQPIIWLFLFGALFSKAPEGFLPGVDSYGNFLGAGLIVFTAFS
GALNSGLPLMFDREFGFLNRLLVAPLTSRLSIVLSSFFYITILSFVQSIVIMVVSYILGYGWPNLYGLGIVFTTLILLVL
FVTSISLCLAFVLPGHIELIALIFVINLPLLFASTALAPISFMPNWLGWLASLNPLTFAIEPIRTAYTETMNLELVALHA
PYGDLTCKSCISILFSLTVFSLIIIRPLLNRKLN
>Mature_274_residues
MELKEYNLFFLYQETFALTKRLFIQLKRRPSTLLAGILQPIIWLFLFGALFSKAPEGFLPGVDSYGNFLGAGLIVFTAFS
GALNSGLPLMFDREFGFLNRLLVAPLTSRLSIVLSSFFYITILSFVQSIVIMVVSYILGYGWPNLYGLGIVFTTLILLVL
FVTSISLCLAFVLPGHIELIALIFVINLPLLFASTALAPISFMPNWLGWLASLNPLTFAIEPIRTAYTETMNLELVALHA
PYGDLTCKSCISILFSLTVFSLIIIRPLLNRKLN

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30553; Mature: 30553

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELKEYNLFFLYQETFALTKRLFIQLKRRPSTLLAGILQPIIWLFLFGALFSKAPEGFLP
CCCCCCCEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GVDSYGNFLGAGLIVFTAFSGALNSGLPLMFDREFGFLNRLLVAPLTSRLSIVLSSFFYI
CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
TILSFVQSIVIMVVSYILGYGWPNLYGLGIVFTTLILLVLFVTSISLCLAFVLPGHIELI
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
ALIFVINLPLLFASTALAPISFMPNWLGWLASLNPLTFAIEPIRTAYTETMNLELVALHA
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEEEEC
PYGDLTCKSCISILFSLTVFSLIIIRPLLNRKLN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MELKEYNLFFLYQETFALTKRLFIQLKRRPSTLLAGILQPIIWLFLFGALFSKAPEGFLP
CCCCCCCEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GVDSYGNFLGAGLIVFTAFSGALNSGLPLMFDREFGFLNRLLVAPLTSRLSIVLSSFFYI
CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
TILSFVQSIVIMVVSYILGYGWPNLYGLGIVFTTLILLVLFVTSISLCLAFVLPGHIELI
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
ALIFVINLPLLFASTALAPISFMPNWLGWLASLNPLTFAIEPIRTAYTETMNLELVALHA
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEEEEC
PYGDLTCKSCISILFSLTVFSLIIIRPLLNRKLN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA